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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_128 from
Rhodosporidium toruloides IFO0880
8496
:
K11592 DICER1, DCR1 endoribonuclease Dicer
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4282
12650
Hypothetical Protein
no
0.82
2
mRNA
_8365
16733
Hypothetical Protein
no
0.80
3
mRNA
_6259
14627
HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713
no
0.79
4
mRNA
_8077
16445
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.79
5
mRNA
_1261
9629
K04712 DEGS sphingolipid Delta-4 desaturase
no
0.78
6
mRNA
_7306
15674
KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains
no
0.78
7
mRNA
_695
9063
Hypothetical Protein
no
0.78
8
mRNA
_3785
12153
K15178 RTF1 RNA polymerase-associated protein RTF1
no
0.78
9
mRNA
_1245
9613
HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481
no
0.78
10
mRNA
_6180
14548
KOG0218 Mismatch repair MSH3
no
0.77
11
mRNA
_6455
14823
KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins
no
0.77
12
mRNA
_5006
13374
K20299 VPS53 vacuolar protein sorting-associated protein 53
no
0.77
13
mRNA
_5044
13412
K04717 SGPP2 sphingosine-1-phosphate phosphotase 2
no
0.77
14
mRNA
_3
8371
K15161 CCNC, SSN8 cyclin C
no
0.76
15
mRNA
_4976
13344
Hypothetical Protein
no
0.76
16
mRNA
_3641
12009
K17615 PPG1 serine/threonine-protein phosphatase PPG1
no
0.76
17
mRNA
_437
8805
Hypothetical Protein
no
0.74
18
mRNA
_8205
16573
K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1
no
0.74
19
mRNA
_5807
14175
HMMPfam-Protein of unknown function (DUF2638)-PF10937
no
0.74
20
mRNA
_2804
11172
K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2
no
0.74