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Cofit
Protein
Homologs
Top cofit genes for mRNA_129 from
Rhodosporidium toruloides IFO0880
8497
:
SUPERFAMILY--SSF56112
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_295
8663
KOG3069 Peroxisomal NUDIX hydrolase
no
0.75
2
mRNA
_1836
10204
HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729
no
0.74
3
mRNA
_82
8450
KOG0519 Sensory transduction histidine kinase
no
0.74
4
mRNA
_1909
10277
K01426 E3.5.1.4, amiE amidase
no
0.73
5
mRNA
_1442
9810
K03549 kup KUP system potassium uptake protein
no
0.71
6
mRNA
_1802
10170
K05546 GANAB alpha 1,3-glucosidase
no
0.71
7
mRNA
_5948
14316
HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356
no
0.71
8
mRNA
_6512
14880
KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6
no
0.70
9
mRNA
_1613
9981
K01228 GCS1 mannosyl-oligosaccharide glucosidase
no
0.70
10
mRNA
_3574
11942
ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.70
11
mRNA
_7754
16122
Hypothetical Protein
no
0.70
12
mRNA
_3455
11823
K03424 tatD TatD DNase family protein
no
0.69
13
mRNA
_6329
14697
BLAST clp1-like protein [Moniliophthora roreri MCA 2997]
no
0.69
14
mRNA
_4541
12909
K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family
no
0.68
15
mRNA
_4066
12434
K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase
no
0.68
16
mRNA
_30
8398
KOG2798 Putative trehalase
no
0.68
17
mRNA
_3903
12271
K01273 DPEP membrane dipeptidase
no
0.68
18
mRNA
_5989
14357
SUPERFAMILY--SSF52047
no
0.68
19
mRNA
_5326
13694
K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase
no
0.68
20
mRNA
_7546
15914
K04523 UBQLN, DSK2 ubiquilin
no
0.67