Top cofit genes for mRNA_173 from Rhodosporidium toruloides IFO0880

8541: ProSiteProfiles-F-box domain profile.-PS50181

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_7845	16213	K14154 THI6 thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase	no	0.87
2	mRNA_2677	11045	ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157	no	0.84
3	mRNA_317	8685	HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565	no	0.81
4	mRNA_5711	14079	KOG4654 Uncharacterized conserved protein	no	0.80
5	mRNA_2634	11002	KOG2234 Predicted UDP-galactose transporter	no	0.79
6	mRNA_3496	11864	KOG1198 Zinc-binding oxidoreductase	no	0.78
7	mRNA_2080	10448	Hypothetical Protein	no	0.77
8	mRNA_3121	11489	KOG1039 Predicted E3 ubiquitin ligase	no	0.77
9	mRNA_3589	11957	HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383	no	0.76
10	mRNA_7336	15704	Hypothetical Protein	no	0.76
11	mRNA_6899	15267	K01130 E3.1.6.1, aslA arylsulfatase	no	0.76
12	mRNA_5240	13608	HMMPfam-Ubiquinol-cytochrome-c reductase complex subunit (QCR10)-PF09796	no	0.76
13	mRNA_219	8587	Hypothetical Protein	no	0.75
14	mRNA_6559	14927	Hypothetical Protein	no	0.75
15	mRNA_126	8494	Hypothetical Protein	no	0.75
16	mRNA_1386	9754	K06966 K06966 uncharacterized protein	no	0.74
17	mRNA_2368	10736	Hypothetical Protein	no	0.73
18	mRNA_372	8740	BLAST arsenical pump membrane protein [Exophiala dermat...	no	0.73
19	mRNA_1472	9840	HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF00097,ProSitePatterns-Zinc finger RING-type signature.-PS00518,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850	no	0.73
20	mRNA_4478	12846	K01537 E3.6.3.8 Ca2+-transporting ATPase	no	0.72