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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_251 from
Rhodosporidium toruloides IFO0880
8619
:
HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2352
10720
K02903 RP-L28e, RPL28 large subunit ribosomal protein L28e
no
0.91
2
mRNA
_4726
13094
KOG3214 Uncharacterized Zn ribbon-containing protein
no
0.79
3
mRNA
_6484
14852
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.78
4
mRNA
_1402
9770
K06654 PHO80 phosphate system cyclin PHO80
no
0.76
5
mRNA
_729
9097
BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi...
no
0.76
6
mRNA
_3596
11964
HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197
no
0.76
7
mRNA
_1993
10361
Hypothetical Protein
no
0.75
8
mRNA
_300
8668
BLAST transcription factor hoxa13 [Aspergillus bombycis]
no
0.75
9
mRNA
_4962
13330
Hypothetical Protein
no
0.74
10
mRNA
_7852
16220
Hypothetical Protein
no
0.73
11
mRNA
_4063
12431
K10777 LIG4, DNL4 DNA ligase 4
no
0.73
12
mRNA
_6896
15264
KOG1399 Flavin-containing monooxygenase
no
0.73
13
mRNA
_1620
9988
Hypothetical Protein
no
0.73
14
mRNA
_6752
15120
Hypothetical Protein
no
0.72
15
mRNA
_691
9059
BLAST gliotoxin biosynthesis protein GliK [Marssonina b...
no
0.72
16
mRNA
_7280
15648
Hypothetical Protein
no
0.72
17
mRNA
_5742
14110
BLAST spindle pole body protein [Moesziomyces antarcticus T...
no
0.72
18
mRNA
_4194
12562
K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase
no
0.72
19
mRNA
_865
9233
Hypothetical Protein
no
0.71
20
mRNA
_3527
11895
K08658 RCE1, FACE2 prenyl protein peptidase
no
0.71