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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_420 from
Rhodosporidium toruloides IFO0880
8788
:
K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase
KEGG: glutathione S-transferase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_751
9119
K19476 IST1 vacuolar protein sorting-associated protein IST1
no
0.82
2
mRNA
_3831
12199
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.82
3
mRNA
_6455
14823
KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins
no
0.79
4
mRNA
_3909
12277
K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1
no
0.78
5
mRNA
_3741
12109
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.77
6
mRNA
_1596
9964
K14557 UTP6 U3 small nucleolar RNA-associated protein 6
no
0.77
7
mRNA
_3865
12233
HMMPfam-DASH complex subunit Spc34-PF08657
no
0.76
8
mRNA
_1740
10108
K20828 ZNF143_76, STAF zinc finger protein 143/76
no
0.75
9
mRNA
_917
9285
Hypothetical Protein
no
0.75
10
mRNA
_347
8715
K01358 clpP, CLPP ATP-dependent Clp protease, protease subunit
no
0.74
11
mRNA
_7974
16342
Hypothetical Protein
no
0.74
12
mRNA
_4399
12767
HMMPfam-CFEM domain-PF05730
no
0.74
13
mRNA
_4976
13344
Hypothetical Protein
no
0.74
14
mRNA
_5826
14194
SUPERFAMILY--SSF52047
no
0.73
15
mRNA
_7178
15546
KOG0417 Ubiquitin-protein ligase
no
0.73
16
mRNA
_5990
14358
Hypothetical Protein
no
0.73
17
mRNA
_4087
12455
HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474
no
0.73
18
mRNA
_7924
16292
Hypothetical Protein
no
0.72
19
mRNA
_746
9114
KOG0143 Iron/ascorbate family oxidoreductases
no
0.72
20
mRNA
_2665
11033
HMMPfam-Protein of unknown function (DUF3431)-PF11913
no
0.72