Top cofit genes for mRNA_442 from Rhodosporidium toruloides IFO0880

8810: K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_632	9000	K17900 ATG15, AUT5 lipase ATG15	no	0.85
2	mRNA_6291	14659	K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate	no	0.85
3	mRNA_7121	15489	PRINTS-Proline rich extensin signature-PR01217,ProSiteProfiles-EH domain profile.-PS50031	no	0.80
4	mRNA_8398	16766	HMMPfam-Histone deacetylation protein Rxt3-PF08642	no	0.79
5	mRNA_1217	9585	K10580 UBE2N, BLU, UBC13 ubiquitin-conjugating enzyme E2 N	no	0.79
6	mRNA_5688	14056	K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1	no	0.79
7	mRNA_3685	12053	KOG4212 RNA-binding protein hnRNP-M	no	0.78
8	mRNA_6979	15347	KOG2789 Putative Zn-finger protein	no	0.78
9	mRNA_783	9151	HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481	no	0.77
10	mRNA_4547	12915	ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199	no	0.77
11	mRNA_641	9009	K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4	no	0.77
12	mRNA_2322	10690	Hypothetical Protein	no	0.76
13	mRNA_1292	9660	K10848 ERCC4, XPF DNA excision repair protein ERCC-4	no	0.76
14	mRNA_506	8874	K08793 STK32, YANK serine/threonine kinase 32	no	0.76
15	mRNA_626	8994	K19423 epsE glycosyltransferase EpsE	no	0.76
16	mRNA_1946	10314	KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif	no	0.76
17	mRNA_6797	15165	BLAST Formin-like protein 3 [Rhizoctonia solani]	no	0.76
18	mRNA_8394	16762	KOG3680 Uncharacterized conserved protein	no	0.75
19	mRNA_3758	12126	HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208	no	0.75
20	mRNA_7739	16107	K20476 RIC1 RAB6A-GEF complex partner protein 1	no	0.75