Top cofit genes for mRNA_549 from Rhodosporidium toruloides IFO0880

8917: K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_5357	13725	HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335	no	0.85
2	mRNA_5463	13831	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.84
3	mRNA_2672	11040	K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17	no	0.84
4	mRNA_1920	10288	Hypothetical Protein	no	0.84
5	mRNA_8120	16488	Hypothetical Protein	no	0.83
6	mRNA_2564	10932	SUPERFAMILY--SSF52058	no	0.83
7	mRNA_2587	10955	K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1	no	0.82
8	mRNA_8312	16680	K17868 DPH7, RRT2 diphthine methyl ester acylhydrolase	no	0.82
9	mRNA_3456	11824	HMMPfam-Family of unknown function (DUF500)-PF04366	no	0.82
10	mRNA_2865	11233	SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717	no	0.81
11	mRNA_269	8637	BLAST nitrogen assimilation transcription factor [Rhodo...	no	0.81
12	mRNA_5107	13475	K03130 TAF5 transcription initiation factor TFIID subunit 5	no	0.80
13	mRNA_2955	11323	Hypothetical Protein	no	0.80
14	mRNA_1267	9635	K00814 GPT, ALT alanine transaminase	no	0.79
15	mRNA_3128	11496	BLAST protein transporter [Pseudozyma hubeiensis SY62]	no	0.79
16	mRNA_996	9364	K19791 FET3_5 iron transport multicopper oxidase	no	0.79
17	mRNA_1237	9605	SUPERFAMILY--SSF52047	no	0.79
18	mRNA_103	8471	Hypothetical Protein	no	0.79
19	mRNA_2432	10800	K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20	no	0.78
20	mRNA_319	8687	KOG2134 Polynucleotide kinase 3' phosphatase	no	0.78