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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_562 from
Rhodosporidium toruloides IFO0880
8930
:
HMMPfam-HPC2 and ubinuclein domain-PF08729
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5918
14286
K11498 CENPE centromeric protein E
no
0.73
2
mRNA
_1390
9758
KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference
no
0.71
3
mRNA
_5383
13751
Hypothetical Protein
no
0.68
4
mRNA
_1508
9876
KOG3140 Predicted membrane protein
no
0.67
5
mRNA
_1488
9856
K15371 GDH2 glutamate dehydrogenase
no
0.66
6
mRNA
_727
9095
HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571
no
0.64
7
mRNA
_4239
12607
Hypothetical Protein
no
0.64
8
mRNA
_7778
16146
Hypothetical Protein
no
0.64
9
mRNA
_2401
10769
HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300
no
0.63
10
mRNA
_515
8883
Hypothetical Protein
no
0.63
11
mRNA
_8470
16838
Hypothetical Protein
no
0.62
12
mRNA
_6473
14841
HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723
no
0.61
13
mRNA
_652
9020
HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
no
0.61
14
mRNA
_1454
9822
K11390 CLYBL citrate lyase subunit beta-like protein
no
0.60
15
mRNA
_8087
16455
ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113
no
0.60
16
mRNA
_1425
9793
HMMPfam-Protein of unknown function (DUF4449)-PF14613,SUPERFAMILY--SSF55394
no
0.59
17
mRNA
_3138
11506
K13106 BUD13, CWC26 pre-mRNA-splicing factor CWC26
no
0.59
18
mRNA
_4299
12667
K12617 PATL1, PAT1 DNA topoisomerase 2-associated protein PAT1
no
0.59
19
mRNA
_6683
15051
HMMPfam-Thioesterase-like superfamily-PF13622
no
0.58
20
mRNA
_1351
9719
Hypothetical Protein
no
0.58