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Cofit
Protein
Homologs
Top cofit genes for mRNA_572 from
Rhodosporidium toruloides IFO0880
8940
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2832
11200
KOG1611 Predicted short chain-type dehydrogenase
no
0.73
2
mRNA
_2594
10962
K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein
no
0.71
3
mRNA
_1066
9434
KOG1383 Glutamate decarboxylase/sphingosine phosphate lyase
no
0.71
4
mRNA
_2380
10748
K07889 RAB5C Ras-related protein Rab-5C
no
0.69
5
mRNA
_3088
11456
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.69
6
mRNA
_4845
13213
Hypothetical Protein
no
0.69
7
mRNA
_3442
11810
SUPERFAMILY--SSF52047
no
0.68
8
mRNA
_2081
10449
BLAST 163.m06341p [Cryptococcus neoformans]
no
0.67
9
mRNA
_7257
15625
ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729
no
0.67
10
mRNA
_480
8848
ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689
no
0.67
11
mRNA
_62
8430
HMMPfam-HPP family-PF04982
no
0.66
12
mRNA
_2206
10574
K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11
no
0.66
13
mRNA
_6345
14713
HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961
no
0.66
14
mRNA
_1147
9515
KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)
no
0.65
15
mRNA
_6647
15015
HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648
no
0.65
16
mRNA
_5010
13378
K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37
no
0.65
17
mRNA
_2784
11152
K20241 WDR44, RAB11BP WD repeat-containing protein 44
no
0.65
18
mRNA
_5829
14197
K00228 CPOX, hemF coproporphyrinogen III oxidase
no
0.65
19
mRNA
_8161
16529
BLAST Actin cytoskeleton-regulatory complex protein pan1 [R...
no
0.65
20
mRNA
_2287
10655
KOG3870 Uncharacterized conserved protein
no
0.64