Top cofit genes for mRNA_653 from Rhodosporidium toruloides IFO0880

9021: HMMPfam-RTA1 like protein-PF04479

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_2479	10847	Hypothetical Protein	no	0.69
2	mRNA_1766	10134	K03097 CSNK2A casein kinase II subunit alpha	no	0.67
3	mRNA_1159	9527	HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540	no	0.67
4	mRNA_2654	11022	K00864 glpK, GK glycerol kinase	no	0.63
5	mRNA_5281	13649	KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily	no	0.63
6	mRNA_3525	11893	K08139 HXT MFS transporter, SP family, sugar-H+ symporter	no	0.62
7	mRNA_2084	10452	KOG0254 Predicted transporter (major facilitator superfamily)	no	0.62
8	mRNA_4142	12510	Hypothetical Protein	no	0.62
9	mRNA_8283	16651	HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716	no	0.61
10	mRNA_7839	16207	Hypothetical Protein	no	0.61
11	mRNA_1356	9724	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701	no	0.61
12	mRNA_5385	13753	Hypothetical Protein	no	0.60
13	mRNA_2451	10819	Hypothetical Protein	no	0.59
14	mRNA_5961	14329	HMMPfam-F-box-like-PF12937	no	0.59
15	mRNA_7768	16136	SUPERFAMILY--SSF52058	no	0.59
16	mRNA_4091	12459	K03362 FBXW1_11, BTRC, beta-TRCP F-box and WD-40 domain protein 1/11	no	0.58
17	mRNA_4299	12667	K12617 PATL1, PAT1 DNA topoisomerase 2-associated protein PAT1	no	0.58
18	mRNA_4925	13293	ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045	no	0.58
19	mRNA_1082	9450	Hypothetical Protein	no	0.58
20	mRNA_248	8616	K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase	no	0.58