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Cofit
Protein
Homologs
Top cofit genes for mRNA_661 from
Rhodosporidium toruloides IFO0880
9029
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5235
13603
KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes
no
0.67
2
mRNA
_6098
14466
Hypothetical Protein
no
0.67
3
mRNA
_3098
11466
ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383
no
0.66
4
mRNA
_2540
10908
SUPERFAMILY--SSF52058
no
0.64
5
mRNA
_8283
16651
HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716
no
0.62
6
mRNA
_6097
14465
KOG4313 Thiamine pyrophosphokinase
no
0.62
7
mRNA
_39
8407
HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695
no
0.61
8
mRNA
_4046
12414
HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452
no
0.61
9
mRNA
_3669
12037
KOG1756 Histone 2A
no
0.61
10
mRNA
_706
9074
BLAST Myelin gene regulatory factor [Chaetura pelagica]
no
0.60
11
mRNA
_6274
14642
Hypothetical Protein
no
0.60
12
mRNA
_5449
13817
HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
no
0.60
13
mRNA
_6204
14572
KOG1618 Predicted phosphatase
no
0.60
14
mRNA
_3206
11574
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.60
15
mRNA
_1271
9639
K05349 bglX beta-glucosidase
no
0.58
16
mRNA
_248
8616
K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase
no
0.58
17
mRNA
_7707
16075
HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098
no
0.57
18
mRNA
_7491
15859
K19267 qorB NAD(P)H dehydrogenase (quinone)
no
0.57
19
mRNA
_346
8714
KOG3113 Uncharacterized conserved protein
no
0.56
20
mRNA
_143
8511
KOG4136 Predicted mitochondrial cholesterol transporter
no
0.56