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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_755 from
Rhodosporidium toruloides IFO0880
9123
:
HMMPfam-Ribosomal protein L9, N-terminal domain-PF01281,SUPERFAMILY--SSF55658
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7016
15384
K01142 E3.1.11.2, xthA exodeoxyribonuclease III
no
0.79
2
mRNA
_4812
13180
K15255 PIF1 ATP-dependent DNA helicase PIF1
no
0.78
3
mRNA
_4338
12706
SUPERFAMILY--SSF53098
no
0.77
4
mRNA
_3131
11499
KOG1230 Protein containing repeated kelch motifs
no
0.75
5
mRNA
_2961
11329
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.75
6
mRNA
_3565
11933
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.75
7
mRNA
_5212
13580
K00624 E2.3.1.7 carnitine O-acetyltransferase
no
0.72
8
mRNA
_7298
15666
Hypothetical Protein
no
0.72
9
mRNA
_7647
16015
KOG2741 Dimeric dihydrodiol dehydrogenase
no
0.71
10
mRNA
_5284
13652
Hypothetical Protein
no
0.70
11
mRNA
_3095
11463
K01739 metB cystathionine gamma-synthase
no
0.70
12
mRNA
_1621
9989
Hypothetical Protein
no
0.70
13
mRNA
_6231
14599
KOG2358 NifU-like domain-containing proteins
no
0.70
14
mRNA
_468
8836
Hypothetical Protein
no
0.69
15
mRNA
_88
8456
K17361 ACOT9 acyl-coenzyme A thioesterase 9
no
0.68
16
mRNA
_2219
10587
Hypothetical Protein
no
0.68
17
mRNA
_2129
10497
K17741 GRE2 NADPH-dependent methylglyoxal reductase
no
0.68
18
mRNA
_3218
11586
PRINTS-Proline rich extensin signature-PR01217
no
0.68
19
mRNA
_5305
13673
K14859 SSF1_2 ribosome biogenesis protein SSF1/2
no
0.67
20
mRNA
_60
8428
Hypothetical Protein
no
0.67