Top cofit genes for mRNA_856 from Rhodosporidium toruloides IFO0880

9224: KOG0828 Predicted E3 ubiquitin ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_3220	11588	KOG0686 COP9 signalosome, subunit CSN1	no	0.77
2	mRNA_7716	16084	HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383	no	0.75
3	mRNA_4990	13358	K00354 E1.6.99.1 NADPH2 dehydrogenase	no	0.71
4	mRNA_319	8687	KOG2134 Polynucleotide kinase 3' phosphatase	no	0.71
5	mRNA_7894	16262	HMMPfam-Eisosome component PIL1-PF13805	no	0.70
6	mRNA_3537	11905	Hypothetical Protein	no	0.70
7	mRNA_2982	11350	Hypothetical Protein	no	0.70
8	mRNA_1265	9633	K14861 URB1 nucleolar pre-ribosomal-associated protein 1	no	0.69
9	mRNA_6212	14580	SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045	no	0.69
10	mRNA_7652	16020	HMMPfam-XPG I-region-PF00867,PRINTS-Xeroderma pigmentosum group G/yeast RAD superfamily signature-PR00853,SMART-Xeroderma pigmentosum G I-region-SM00484,SUPERFAMILY--SSF47807,SUPERFAMILY--SSF88723	no	0.68
11	mRNA_6443	14811	K10427 DCTN5 dynactin 5	no	0.68
12	mRNA_2114	10482	K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6	no	0.68
13	mRNA_7548	15916	K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4	no	0.67
14	mRNA_2495	10863	K03507 DPB11 DNA replication regulator DPB11	no	0.67
15	mRNA_7131	15499	K17800 LETM1, MDM38 LETM1 and EF-hand domain-containing protein 1, mitochondrial	no	0.67
16	mRNA_2898	11266	KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily	no	0.66
17	mRNA_4066	12434	K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase	no	0.66
18	mRNA_3269	11637	Hypothetical Protein	no	0.65
19	mRNA_6004	14372	SUPERFAMILY--SSF52047	no	0.65
20	mRNA_8084	16452	K05351 E1.1.1.9 D-xylulose reductase	no	0.65