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Cofit
Protein
Homologs
Top cofit genes for mRNA_1038 from
Rhodosporidium toruloides IFO0880
9406
:
HMMPfam-Protein of unknown function (DUF2034)-PF10356
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_3741
12109
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.75
2
mRNA
_5770
14138
K15171 SUPT4H1, SPT4 transcription elongation factor SPT4
no
0.73
3
mRNA
_4227
12595
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452
no
0.72
4
mRNA
_1218
9586
SUPERFAMILY--SSF52047
no
0.72
5
mRNA
_1879
10247
HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
no
0.71
6
mRNA
_5660
14028
Hypothetical Protein
no
0.71
7
mRNA
_6638
15006
K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter
no
0.71
8
mRNA
_2713
11081
BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ...
no
0.71
9
mRNA
_6504
14872
Hypothetical Protein
no
0.71
10
mRNA
_8464
16832
Hypothetical Protein
no
0.70
11
mRNA
_2691
11059
Hypothetical Protein
no
0.70
12
mRNA
_6584
14952
BLAST conserved fungal protein [Moniliophthora roreri M...
no
0.70
13
mRNA
_3187
11555
BLAST Protein disulfide-isomerase erp38 [Hypsizygus marmoreus]
no
0.70
14
mRNA
_537
8905
KOG0725 Reductases with broad range of substrate specificities
no
0.69
15
mRNA
_665
9033
K08853 AAK AP2-associated kinase
no
0.69
16
mRNA
_8077
16445
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.69
17
mRNA
_5655
14023
K01115 PLD1_2 phospholipase D1/2
no
0.69
18
mRNA
_1721
10089
K11483 HOS2 histone deacetylase HOS2
no
0.68
19
mRNA
_256
8624
K11254 H4 histone H4
no
0.68
20
mRNA
_3492
11860
HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927
no
0.68