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Cofit
Protein
Homologs
Top cofit genes for mRNA_1084 from
Rhodosporidium toruloides IFO0880
9452
:
BLAST secreted protein [Melampsora larici-populina 98AG31]
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8353
16721
BLAST Clampless protein 1 [Leucoagaricus sp. SymC.cos]
no
0.73
2
mRNA
_1453
9821
HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443
no
0.73
3
mRNA
_3699
12067
KOG0870 DNA polymerase epsilon, subunit D
no
0.72
4
mRNA
_8433
16801
SUPERFAMILY--SSF54909
no
0.69
5
mRNA
_7651
16019
K03671 trxA thioredoxin 1
no
0.69
6
mRNA
_1109
9477
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
no
0.69
7
mRNA
_1450
9818
K20826 RPAP1 RNA polymerase II-associated protein 1
no
0.67
8
mRNA
_5271
13639
K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10
no
0.66
9
mRNA
_7430
15798
HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335
no
0.66
10
mRNA
_1652
10020
Hypothetical Protein
no
0.66
11
mRNA
_675
9043
BLAST expressed protein [Cryptococcus neoformans var. neofo...
no
0.66
12
mRNA
_3570
11938
HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630
no
0.65
13
mRNA
_6416
14784
Hypothetical Protein
no
0.65
14
mRNA
_473
8841
K15255 PIF1 ATP-dependent DNA helicase PIF1
no
0.65
15
mRNA
_7478
15846
Hypothetical Protein
no
0.65
16
mRNA
_7434
15802
HMMPfam-Outer membrane protein TOM13-PF08219
no
0.64
17
mRNA
_7352
15720
Hypothetical Protein
no
0.64
18
mRNA
_8174
16542
K00645 fabD [acyl-carrier-protein] S-malonyltransferase
no
0.64
19
mRNA
_8025
16393
KOG0118 FOG RRM domain
no
0.63
20
mRNA
_6761
15129
K00944 AK3 nucleoside-triphosphate--adenylate kinase
no
0.63