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Cofit
Protein
Homologs
Top cofit genes for mRNA_1089 from
Rhodosporidium toruloides IFO0880
9457
:
K01638 aceB, glcB malate synthase
SEED: Malate synthase (EC 2.3.3.9)
KEGG: malate synthase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5654
14022
K01637 E4.1.3.1, aceA isocitrate lyase
no
0.96
2
mRNA
_5877
14245
K00624 E2.3.1.7 carnitine O-acetyltransferase
no
0.96
3
mRNA
_6437
14805
K07511 ECHS1 enoyl-CoA hydratase
no
0.96
4
mRNA
_3622
11990
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.95
5
mRNA
_5445
13813
K07513 ACAA1 acetyl-CoA acyltransferase 1
no
0.94
6
mRNA
_5693
14061
KOG4186 Peroxisomal biogenesis protein (peroxin)
no
0.93
7
mRNA
_299
8667
ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199
no
0.93
8
mRNA
_595
8963
KOG0137 Very-long-chain acyl-CoA dehydrogenase
no
0.92
9
mRNA
_5702
14070
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
no
0.91
10
mRNA
_8431
16799
K15105 SLC25A12_13, AGC solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13
no
0.91
11
mRNA
_5137
13505
K13342 PEX5, PXR1 peroxin-5
no
0.89
12
mRNA
_333
8701
Hypothetical Protein
no
0.89
13
mRNA
_7055
15423
K03841 FBP, fbp fructose-1,6-bisphosphatase I
no
0.88
14
mRNA
_6441
14809
K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit
no
0.88
15
mRNA
_2473
10841
K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP)
no
0.87
16
mRNA
_7978
16346
K13341 PEX7, PTS2R peroxin-7
no
0.87
17
mRNA
_5031
13399
HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
no
0.86
18
mRNA
_3044
11412
K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1
no
0.86
19
mRNA
_8410
16778
K12761 SNF1 carbon catabolite-derepressing protein kinase
no
0.85
20
mRNA
_2443
10811
HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113
no
0.84