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Cofit
Protein
Homologs
Top cofit genes for mRNA_1094 from
Rhodosporidium toruloides IFO0880
9462
:
HMMPfam-Frag1/DRAM/Sfk1 family-PF10277
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_3067
11435
HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197
no
0.74
2
mRNA
_2191
10559
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048
no
0.74
3
mRNA
_8428
16796
KOG3808 Uncharacterized conserved protein
no
0.73
4
mRNA
_607
8975
K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase
no
0.70
5
mRNA
_3874
12242
KOG1535 Predicted fumarylacetoacetate hydralase
no
0.70
6
mRNA
_8078
16446
HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786
no
0.66
7
mRNA
_2752
11120
HMMPfam-F-box-like-PF12937
no
0.65
8
mRNA
_4310
12678
Hypothetical Protein
no
0.64
9
mRNA
_3551
11919
K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11
no
0.64
10
mRNA
_5252
13620
BLAST LPS-assembly protein LptD [Rhizoctonia solani]
no
0.63
11
mRNA
_6837
15205
HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373
no
0.63
12
mRNA
_7243
15611
Hypothetical Protein
no
0.63
13
mRNA
_4305
12673
SUPERFAMILY--SSF69989
no
0.62
14
mRNA
_1428
9796
HMMPfam-Protein of unknown function (DUF3237)-PF11578
no
0.62
15
mRNA
_4031
12399
K08726 EPHX2 soluble epoxide hydrolase / lipid-phosphate phosphatase
no
0.62
16
mRNA
_708
9076
HMMPfam-Ferritin-like domain-PF13668
no
0.62
17
mRNA
_4897
13265
K01759 GLO1, gloA lactoylglutathione lyase
no
0.61
18
mRNA
_5050
13418
Hypothetical Protein
no
0.61
19
mRNA
_221
8589
HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462
no
0.60
20
mRNA
_2882
11250
Hypothetical Protein
no
0.60