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Cofit
Protein
Homologs
Top cofit genes for mRNA_1156 from
Rhodosporidium toruloides IFO0880
9524
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5042
13410
K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2
no
0.85
2
mRNA
_3504
11872
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.83
3
mRNA
_7009
15377
Hypothetical Protein
no
0.83
4
mRNA
_7771
16139
HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892
no
0.80
5
mRNA
_2193
10561
HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474
no
0.80
6
mRNA
_2156
10524
Hypothetical Protein
no
0.78
7
mRNA
_4624
12992
Hypothetical Protein
no
0.77
8
mRNA
_1969
10337
K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1
no
0.77
9
mRNA
_118
8486
HMMPfam-Protein of unknown function (DUF1674)-PF07896
no
0.77
10
mRNA
_1060
9428
K01530 E3.6.3.1 phospholipid-translocating ATPase
no
0.76
11
mRNA
_5231
13599
Hypothetical Protein
no
0.76
12
mRNA
_7486
15854
K08287 E2.7.12.1 dual-specificity kinase
no
0.75
13
mRNA
_1538
9906
K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10
no
0.75
14
mRNA
_5055
13423
KOG1289 Amino acid transporters
no
0.75
15
mRNA
_523
8891
K11644 SIN3A paired amphipathic helix protein Sin3a
no
0.75
16
mRNA
_5551
13919
ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112
no
0.74
17
mRNA
_263
8631
K01537 E3.6.3.8 Ca2+-transporting ATPase
no
0.74
18
mRNA
_1560
9928
HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370
no
0.74
19
mRNA
_4190
12558
Hypothetical Protein
no
0.74
20
mRNA
_1912
10280
K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2
no
0.74