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Cofit
Protein
Homologs
Top cofit genes for mRNA_1173 from
Rhodosporidium toruloides IFO0880
9541
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1473
9841
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.75
2
mRNA
_3413
11781
K00622 nat arylamine N-acetyltransferase
no
0.74
3
mRNA
_135
8503
HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112
no
0.73
4
mRNA
_4302
12670
K07819 B3GALT1 beta-1,3-galactosyltransferase 1
no
0.71
5
mRNA
_624
8992
K13886 CORO1B_1C_6 coronin-1B/1C/6
no
0.71
6
mRNA
_4295
12663
K15454 PUS9 tRNA pseudouridine synthase 9
no
0.71
7
mRNA
_6233
14601
K16945 CDC11 cell division control protein 11
no
0.69
8
mRNA
_1899
10267
K14946 RBFOX, FOX RNA binding protein fox-1
no
0.69
9
mRNA
_7362
15730
K13035 NIT4 beta-cyano-L-alanine hydratase/nitrilase
no
0.69
10
mRNA
_7346
15714
Hypothetical Protein
no
0.68
11
mRNA
_209
8577
K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2
no
0.68
12
mRNA
_1923
10291
K19787 CARNMT1 carnosine N-methyltransferase
no
0.68
13
mRNA
_2936
11304
Hypothetical Protein
no
0.68
14
mRNA
_8002
16370
KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains
no
0.67
15
mRNA
_5435
13803
Hypothetical Protein
no
0.67
16
mRNA
_8012
16380
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.67
17
mRNA
_7633
16001
KOG1947 Leucine rich repeat proteins, some proteins contain F-box
no
0.66
18
mRNA
_7030
15398
SUPERFAMILY--SSF50685
no
0.65
19
mRNA
_1829
10197
K20238 E2.1.1.317 sphingolipid C9-methyltransferase
no
0.65
20
mRNA
_3701
12069
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
no
0.65