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Cofit
Protein
Homologs
Top cofit genes for mRNA_1300 from
Rhodosporidium toruloides IFO0880
9668
:
BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2175
10543
HMMPfam-Mus7/MMS22 family-PF09462
no
0.86
2
mRNA
_4387
12755
HMMPfam-Ctf8-PF09696
no
0.86
3
mRNA
_6687
15055
BLAST Wings apart-like protein [Xanthophyllomyces dendrorhous]
no
0.84
4
mRNA
_5169
13537
Hypothetical Protein
no
0.83
5
mRNA
_4889
13257
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.81
6
mRNA
_6356
14724
K01477 alc, ALLC allantoicase
no
0.81
7
mRNA
_3920
12288
K12767 RIM15 serine/threonine-protein kinase RIM15
no
0.81
8
mRNA
_2536
10904
K15601 KDM3 lysine-specific demethylase 3
no
0.80
9
mRNA
_1186
9554
K20410 MAPKAP1, SIN1 target of rapamycin complex 2 subunit MAPKAP1
no
0.80
10
mRNA
_4727
13095
Hypothetical Protein
no
0.80
11
mRNA
_7147
15515
Hypothetical Protein
no
0.79
12
mRNA
_5640
14008
BLAST putative acyl- dehydrogenase [Moniliophthora rore...
no
0.79
13
mRNA
_2061
10429
HMMPfam-Protein of unknown function (DUF1640)-PF07798
no
0.79
14
mRNA
_296
8664
K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3
no
0.79
15
mRNA
_6019
14387
Hypothetical Protein
no
0.79
16
mRNA
_4365
12733
HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920
no
0.79
17
mRNA
_3284
11652
BLAST something about silencing, SAS, complex subunit 4 [Rh...
no
0.78
18
mRNA
_6180
14548
KOG0218 Mismatch repair MSH3
no
0.78
19
mRNA
_7266
15634
Hypothetical Protein
no
0.78
20
mRNA
_8154
16522
HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179
no
0.78