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Cofit
Protein
Homologs
Top cofit genes for mRNA_1379 from
Rhodosporidium toruloides IFO0880
9747
:
HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6380
14748
HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383
no
0.85
2
mRNA
_7020
15388
K11446 KDM5, JARID1 histone demethylase JARID1
no
0.81
3
mRNA
_4997
13365
HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906
no
0.80
4
mRNA
_4041
12409
HMMPfam-Sds3-like-PF08598
no
0.78
5
mRNA
_2017
10385
K12600 SKI3, TTC37 superkiller protein 3
no
0.77
6
mRNA
_4388
12756
KOG2084 Predicted histone tail methylase containing SET domain
no
0.77
7
mRNA
_2192
10560
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.76
8
mRNA
_6893
15261
Hypothetical Protein
no
0.75
9
mRNA
_3857
12225
Interpro Mysoin-binding motif of peroxisomes
no
0.75
10
mRNA
_3423
11791
KOG3655 Drebrins and related actin binding proteins
no
0.75
11
mRNA
_5623
13991
KOG3393 Predicted membrane protein
no
0.74
12
mRNA
_180
8548
K01647 CS, gltA citrate synthase
no
0.74
13
mRNA
_4387
12755
HMMPfam-Ctf8-PF09696
no
0.74
14
mRNA
_3841
12209
K13431 SRPR signal recognition particle receptor subunit alpha
no
0.74
15
mRNA
_5546
13914
Hypothetical Protein
no
0.74
16
mRNA
_6075
14443
BLAST Thioredoxin/protein disulfide isomerase [Xanthophyllo...
no
0.73
17
mRNA
_4851
13219
K06679 MAD1 mitotic spindle assembly checkpoint protein MAD1
no
0.73
18
mRNA
_7433
15801
K10356 MYO1 myosin I
no
0.73
19
mRNA
_733
9101
K13954 yiaY alcohol dehydrogenase
no
0.72
20
mRNA
_6641
15009
K11863 ATXN3, MJD Ataxin-3
no
0.72