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Cofit
Protein
Homologs
Top cofit genes for mRNA_1400 from
Rhodosporidium toruloides IFO0880
9768
:
K20360 TBC1D22, GYP1 TBC1 domain family member 2
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1680
10048
BLAST cyclin-like F-box domain containing protein [Rhod...
no
0.71
2
mRNA
_5624
13992
KOG1611 Predicted short chain-type dehydrogenase
no
0.70
3
mRNA
_8178
16546
Hypothetical Protein
no
0.69
4
mRNA
_1910
10278
HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355
no
0.68
5
mRNA
_849
9217
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047
no
0.68
6
mRNA
_8
8376
K01194 TREH, treA, treF alpha,alpha-trehalase
no
0.68
7
mRNA
_1855
10223
BLAST secreted protein [Moesziomyces antarcticus]
no
0.67
8
mRNA
_7184
15552
K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1
no
0.66
9
mRNA
_609
8977
K19001 HELLS, DDM1 ATP-dependent DNA helicase
no
0.66
10
mRNA
_7417
15785
K03353 APC6, CDC16 anaphase-promoting complex subunit 6
no
0.66
11
mRNA
_2331
10699
HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556
no
0.65
12
mRNA
_920
9288
BLAST cytochrome c heme-binding site [Moesziomyces anta...
no
0.65
13
mRNA
_4587
12955
HMMPfam-Complex1_LYR-like-PF13232
no
0.64
14
mRNA
_6532
14900
K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
no
0.64
15
mRNA
_6016
14384
Hypothetical Protein
no
0.64
16
mRNA
_4902
13270
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.63
17
mRNA
_6870
15238
K08736 MSH3 DNA mismatch repair protein MSH3
no
0.63
18
mRNA
_8343
16711
Hypothetical Protein
no
0.63
19
mRNA
_2467
10835
Hypothetical Protein
no
0.63
20
mRNA
_5863
14231
K09281 K09281 copper-fist transcription factor
no
0.63