Protein Info for mRNA_1766 in Rhodosporidium toruloides IFO0880

Name: 10134
Annotation: K03097 CSNK2A casein kinase II subunit alpha

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 PF00069: Pkinase" amino acids 43 to 328 (286 residues), 206.6 bits, see alignment E=6.9e-65 PF07714: Pkinase_Tyr" amino acids 44 to 226 (183 residues), 62.9 bits, see alignment E=4.7e-21 PF01636: APH" amino acids 151 to 212 (62 residues), 23.4 bits, see alignment E=8e-09

Best Hits

Swiss-Prot: 64% identical to CSK2A_NEUCR: Casein kinase II subunit alpha (cka) from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

KEGG orthology group: K03097, casein kinase II subunit alpha [EC: 2.7.11.1] (inferred from 65% identity to cnb:CNBF1910)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.11.1

Use Curated BLAST to search for 2.7.11.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (373 amino acids)

>mRNA_1766 K03097 CSNK2A casein kinase II subunit alpha (Rhodosporidium toruloides IFO0880)
MNEPVNPNPPSVARVYANACETLGPSWWDYDSLQLRFGYQDQYEITRRLGRGKYSEVFEG
VDVVHHKLIVIKVLKPIKKKKVKRELKVLSNLRGGPNIIELLDVVRDPQSKTPSIITEHV
DNLDSRQLYPKFTDGDVRYYMYELLKALDFCHSKGIIHRDVKPLNILIDHSQRKLRLIDW
GLAEFYHPGVELNVRVASRYYKAPELLVEYTHYDYSLDLWSVGCTFGTMIFRRDPLFHGS
SNDDQLVKIAKVLGTNDLWAYLDKYQIDIDAELESMVGEHARKPWSKLVTNENRKYLSNS
AIDLIDRLLQYDHVARPTAAEAMQHPYFEQVREADRKRVEEEERARRGEAAAPTAVFMAP
NENDGTFQVQELS