Protein Info for mRNA_1779 in Rhodosporidium toruloides IFO0880

Name: 10147
Annotation: KOG1336 Monodehydroascorbate/ferredoxin reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 538 PF00355: Rieske" amino acids 15 to 81 (67 residues), 48.3 bits, see alignment E=2.4e-16 PF07992: Pyr_redox_2" amino acids 120 to 429 (310 residues), 152.6 bits, see alignment E=4.5e-48 PF00070: Pyr_redox" amino acids 265 to 347 (83 residues), 38.5 bits, see alignment E=4.4e-13

Best Hits

KEGG orthology group: None (inferred from 48% identity to fgr:FG02433.1)

Predicted SEED Role

"Ferredoxin reductase" in subsystem Anaerobic respiratory reductases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (538 amino acids)

>mRNA_1779 KOG1336 Monodehydroascorbate/ferredoxin reductase (Rhodosporidium toruloides IFO0880)
MVRRKEIPFPKEDSESKILLSKVKDQYFANSNKCTHYGAPLVKGVLSQEGRLVCPWHGAC
FNVCSNGDIEDAPGLNALQSFKVETDGSSVYVLADAQTVSNSREPSAPSIEIDSSASRVD
VLIVGGGPGAAHTIEGLRDEGYMGSIKVVSKEPHLPIDRTKISKALISVPEKLALRGKTF
YDKLKVDFVLGVEATKLDFQNSSVELADGKKVQYENLILATGAIPVKIPLDGHDLMNIFT
VRGVKDAEAITAAIGSAEKDENKKNVVVVGSSFIGMEVALALADKAKVTVVGMEKAPFEK
ILGADIGNGIRKFHEGKGTKFILPAELSHFAPSSSDSTHVGSVHLKDGTVLPADVVIMGT
GVKPATQLLKDAGLELEKNASVKTDEVLEVVQLKGKTQGRVFALGDIATFDTPKGENYVQ
HWNVASNHGRAIAHYIATQKREAFDKISVFWSAQGQQLRYAGTTKASSWDDIMIDGHPDQ
LKFVAYYFQGQNVVAAASMQRDPIVAHISELMKIDKMLTKDELKAGKDPLLVPLVGTV