Protein Info for mRNA_1788 in Rhodosporidium toruloides IFO0880

Name: 10156
Annotation: K16368 DGK1 diacylglycerol kinase (CTP)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 292 transmembrane" amino acids 51 to 68 (18 residues), see Phobius details amino acids 77 to 96 (20 residues), see Phobius details amino acids 117 to 136 (20 residues), see Phobius details amino acids 142 to 161 (20 residues), see Phobius details amino acids 181 to 199 (19 residues), see Phobius details amino acids 274 to 291 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (292 amino acids)

>mRNA_1788 K16368 DGK1 diacylglycerol kinase (CTP) (Rhodosporidium toruloides IFO0880)
MSNLRQRAGNGQATAEDKVAQKPLKAPEGIAVDGDRVDKGRWRSGLEIPRKLLHSSIALV
VLYLWLSHPNLLTLLRYLAYATTVIATADVLRFRFAWFERAYEGLLGYFMRESERHAVNG
TIYYLVGVLWCLALYPRDIACLSIIMLSLCDTSASVFGRLFGRYTPRLPFSGTLFGAKKS
LAGTLAAIGVGMAASYVFWSRFAVQGDEGDVSWVAARVASSWRGRVNQDPLRAWGIRRLP
NPQSTLDLHTLVVVNGLTAGLAEAIDFFGFDDNLSLPVLFGFFCWLSMYILG