Protein Info for mRNA_1825 in Rhodosporidium toruloides IFO0880

Name: 10193
Annotation: KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1111 transmembrane" amino acids 87 to 108 (22 residues), see Phobius details amino acids 167 to 187 (21 residues), see Phobius details amino acids 297 to 319 (23 residues), see Phobius details amino acids 346 to 364 (19 residues), see Phobius details amino acids 384 to 403 (20 residues), see Phobius details amino acids 415 to 434 (20 residues), see Phobius details amino acids 454 to 472 (19 residues), see Phobius details amino acids 681 to 697 (17 residues), see Phobius details PF01794: Ferric_reduct" amino acids 303 to 430 (128 residues), 62.7 bits, see alignment E=5.6e-21 PF08022: FAD_binding_8" amino acids 554 to 668 (115 residues), 36.8 bits, see alignment E=5.6e-13 PF08030: NAD_binding_6" amino acids 678 to 763 (86 residues), 42.5 bits, see alignment 1.1e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1111 amino acids)

>mRNA_1825 KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins (Rhodosporidium toruloides IFO0880)
MSATAASQGGAYIPPFATKATTTAAAAATKTTGSLSFAHIASETGSATTTAQIVDSTGGV
DSSSLLQYFTKPYIDAHTLSIPTWRYAYILWFAIVGTLIVWSAVYHLAGTGTGGSALGAW
FRKWSIRRITWTKKVGGTGPGARTGEAEKGAQGTTGVRKKVVFASPTFAQMIAVGVLVLI
ALLVSFVGDDYIAPTTCTFGGDCGYQAYYGASSPPKSTYRAKRALALPDSFRFLSSRQVN
SAIAAQTWLDTITPLRGDKQVAQPVLAKRGVNNPNGWAPFNDPLLASSNTNIAANAWTAA
ARLGLISYAMLPLVITLALKQWPFNIWATPFLTNYHFDKTAILHRWSGRVVWAFSTGHAI
GWIYELCMDRDPFGRIVLIPALQWYRFVAGIVCWFLLTILTAFSFRPLRNRFYELFYWSH
VILVILVLVTAIVHHRPLMYWPIVALAWWGAERAWRFVTLLWVNGVFEGIMLRPSKRAIR
SSSGEFSIVHEKDDATVDEPFVPPVSQHYPPSSPAPLPYQSPSMAHSSPTLYQSTALQPT
STTAPRPLPPPGFANAQLLPGRTIRLTIQTPHAIRWAAGQHLLLYIPSVRLFESHPYTIA
GIDERTKALRPVGGKTVAKGSEIVLLIRAQQGFSRALWDYVVRTRSKRSGARQEEGVTMR
ALVSWPMGSAGRVNWDAYESLTIVCGGTGITFGISVLENACRRMVRRDQQGDAKWKTTRV
RFVWILREYAHLSWVAPTLRRCMEMCDPSQLQIDLFVTHQAPKAPRQRPSAPPYSSYVGA
SGLTSTDELAPPTAPFARQGRSSSPVGRSSFTSDYSDYSDGEETPSRKSSSAGVPQAGQL
PEEYGDQVDSVTDLVLFDGEEDYRTAGDERVSAQLKKEGKLRRALSRRGQGRSIRRPGES
TQQPQPAMLSAEPSFEALPLDHRDEQKSHSAYSTPYDYPGAATASFGDLSQMGRAPLPRD
GSFDWSSTYDDATLGDSASTRHLVKSGARPGLASNRTSHADLASEASLAYLPPTQATRTG
GNDGFFLDITDAEQADIEAVAELVKTGYPRLKQLLDEEVQRSAGKTIVACCGPASLNSVV
RNLVASKIDLKKVARGDPRGQVSLVVEDFAF