Protein Info for mRNA_2052 in Rhodosporidium toruloides IFO0880

Name: 10420
Annotation: KOG1399 Flavin-containing monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 601 PF00743: FMO-like" amino acids 36 to 249 (214 residues), 61.3 bits, see alignment E=1.6e-20 PF13454: NAD_binding_9" amino acids 38 to 100 (63 residues), 24 bits, see alignment E=8.9e-09 PF13450: NAD_binding_8" amino acids 40 to 108 (69 residues), 35.2 bits, see alignment E=3e-12 PF13434: K_oxygenase" amino acids 105 to 276 (172 residues), 37.1 bits, see alignment E=5.3e-13

Best Hits

KEGG orthology group: None (inferred from 48% identity to act:ACLA_097400)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (601 amino acids)

>mRNA_2052 KOG1399 Flavin-containing monooxygenase (Rhodosporidium toruloides IFO0880)
MISIDLDPLTGLPRGLDSAPFVLEDHPVGESGRKLKVAMIGAGFSGIIAGIRIDQHLKDH
VELDIFEKNHSVGGTWFENNYPGLCCDIPAHCYSLTFEPNHRWTNFYASGREILAYLQRV
SAKYKLERFLRFGHKLTAAKWNEKTSQWHLSFDIVDEKDNKVGEKEAVVDAVIQGMGGLS
RWDWPNIPGIKEFKGRLLHSAAYETKAEDEKDKTVAVIGSGSSAIQIVPALQPHAKRVDN
YVRGSAWIATPFASTELLKRKPDANNYTFTEEEKERFEKDPAYYQEFRKSMEKELNAVHG
VTLKGSELQTGAVAAFRELMEKKLETKPEIAKVFIPTFAVGCRRLTPGPGYLEALTSDNV
DFVSTGIKRITESGIETNDGKHREYDTIVSATGFDTSFRPRVPIVGKNGSDVRDLWEDIP
SSYLSMFIGPDHPNYFIINGPNSSLGSGSLLVVFEKEVDYIVKCLGKMVRESVITMAAKQ
EAVNDWQEYVHTYFQKTVFSTKCRSWYKRGLEEGPVTALWPGSALHAIKTIENPRWEDFE
YTHLNKNRLGSSLSSLLLPLRGSDAVTLPTAWLGNGWSKTELEGGDTAYYLDEIDYPPVP
K