Protein Info for mRNA_2104 in Rhodosporidium toruloides IFO0880

Name: 10472
Annotation: KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 679 PF00012: HSP70" amino acids 236 to 504 (269 residues), 22.1 bits, see alignment E=2e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (679 amino acids)

>mRNA_2104 KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily (Rhodosporidium toruloides IFO0880)
MKPRPIYGSPSPQLTQSAMSGSQAYPTPPTTVSPPAAGPDRLPDPSLFTPAVVSPGLATA
NIGPTIVTTMAGQAGAVGVAQEAVADADVGSSLGEMEGKLSVGIDFGTTFSGVAYGSSRH
MGGTVRQILNWPGSYETFRKVPTCIAYYQASPNDEAVVVAWGIEAKALTLREGFYKVEWF
KLFLDPQVLREGRLATSARLPELPHGKQPIDVITDFLSCLWKYAKERITEEIGSVADLEA
ADVILTVPAAWDAAGCQIMRQAALSAGLVQSARGGDTKWRERLRIITEPEAAAIHASTLS
TLFKLKPSQTFIICDAGGGTVDCATYKLIGQLAQLEIAEMSTRSGANCGSLFLDLRFEQL
VKSLLRTHPVHLDAPSLLAFRHSFSECDKLVFAGEADDDTLFRFNCFNIEDSHDPTVGLE
YGELVVPGSVLRRDVFDPVVDQVLSLLTHQLSKLPTQRCDALIVVGGFASSPYLCQRIQR
AFGDKVPIIVRPRDTDVATLQGAARYGLSLSKDGGTVSSVISPRSYIMKCKLPASDEDRY
QRPGFIVRNDAGVEVCENRLSYLVAKGAVVRKGQQLRSRYCKFSRAPTDCMFTAVLYVSD
EDKVYRYTDEGPLEELCRWTVDLSPLPSFQYNASTTPSGGFYTEFTLGLLIDSAEIIGVL
VTDEGEEVGRATFEFFGQD