Protein Info for mRNA_2105 in Rhodosporidium toruloides IFO0880

Name: 10473
Annotation: K17991 PXG peroxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 380 transmembrane" amino acids 177 to 198 (22 residues), see Phobius details amino acids 271 to 291 (21 residues), see Phobius details amino acids 327 to 345 (19 residues), see Phobius details PF05042: Caleosin" amino acids 145 to 313 (169 residues), 244.5 bits, see alignment E=3e-77

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (380 amino acids)

>mRNA_2105 K17991 PXG peroxygenase (Rhodosporidium toruloides IFO0880)
MASPLRGATSGSPLLGAVQPVNVPHSSEDRQTHEAQQDTPMEEEGREFEHRLPWQQEQDA
VEVQGAENGEDKAREGDEWAGRGSDLPGAPFKTTLKGHIAMETRPVSEEAGKGLAEPYVP
RANIAATPERPFGTQEGNWAKQHENDSVLQQHCAFFDPDNDGIVWPWDVFWGFHQLGYAL
PWCILSVMIISTSFSWFTSESWIPNPLFPIHLKHIHRAKHGSDTGTYDHEGRFIPAHFEA
IFSKFDKGSKGGITFYEGLQLIRAQRNILDFAGWIGAFFEMLATYLLIWPADGIMRKEDL
RTVYDGSIFYTIAARERERRRLARSESLLFYLFTFLPLNGIFKGTGRRRPPRTRVAAGRK
AGSVASSCGTRRPGRGGLRD