Protein Info for mRNA_2258 in Rhodosporidium toruloides IFO0880

Name: 10626
Annotation: K04627 STE3 pheromone a factor receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 36 to 55 (20 residues), see Phobius details amino acids 78 to 96 (19 residues), see Phobius details amino acids 112 to 132 (21 residues), see Phobius details amino acids 160 to 182 (23 residues), see Phobius details amino acids 204 to 227 (24 residues), see Phobius details amino acids 269 to 291 (23 residues), see Phobius details PF02076: STE3" amino acids 10 to 290 (281 residues), 289.6 bits, see alignment E=1.3e-90

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (349 amino acids)

>mRNA_2258 K04627 STE3 pheromone a factor receptor (Rhodosporidium toruloides IFO0880)
MPSQLPYIICSGLLVLLNIAPLYWQFGQGNSGPIAMGVWVVIANLNEFVNAVVWFDNAAD
RAPVWCDISVKLSLGEQVGRLAAVFCIARFLADIVSPRATAMTRQDRRRRAIFDYSISFG
VPILVMACHVIYQPNRYGIVRGLGCTFTQVMCWPALVLRIIWPPIFAVGGMLYSAYTVYR
LVRHRRNFRRVVAGAHSALTTARFIRLAALSISYLCIGGPLAFYSAVSYIETSRRYTDYS
WQYVHSAWKLEPVTINEKLYVADLSNWSNVIVGVIFFAAFGFGTEAMAAYARVSRSLRLP
RAFQKFVPAKANPARSGRATAGDHYRANLAEKGMQRGIKVVVEEEHGIV