Protein Info for mRNA_2279 in Rhodosporidium toruloides IFO0880

Name: 10647
Annotation: K16369 CHO2 phosphatidylethanolamine N-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1014 transmembrane" amino acids 43 to 62 (20 residues), see Phobius details amino acids 68 to 89 (22 residues), see Phobius details amino acids 154 to 174 (21 residues), see Phobius details amino acids 180 to 200 (21 residues), see Phobius details amino acids 212 to 232 (21 residues), see Phobius details amino acids 247 to 276 (30 residues), see Phobius details amino acids 386 to 405 (20 residues), see Phobius details amino acids 411 to 433 (23 residues), see Phobius details amino acids 469 to 489 (21 residues), see Phobius details amino acids 498 to 518 (21 residues), see Phobius details amino acids 563 to 592 (30 residues), see Phobius details PF04191: PEMT" amino acids 188 to 289 (102 residues), 73.1 bits, see alignment E=1.1e-24 amino acids 502 to 606 (105 residues), 110.7 bits, see alignment E=2.3e-36

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1014 amino acids)

>mRNA_2279 K16369 CHO2 phosphatidylethanolamine N-methyltransferase (Rhodosporidium toruloides IFO0880)
MRQRRVRNNGPIGKTPDGQLFKIPQTHNVLSGLFDPRLPKSDIDLLTLFLLGMQVVLFAW
FSRTSSRIFFGLYFAFWRLAYDAGLGYVLTKQSKIRWIVKTVQRHGWFDDKRRPAIARWV
RSELKKKMGKDYDFDAVPLEYNVWILFRHSVDVILLNDFLSYVLFSLSYLTIAGPPGHSI
FFHFLRWTGGITLLLFNLWVKTDAHRIVKDFAWYWGDAFFLSLESLVFDGVFEFAPHPMY
SVGYAGYYGLSLIVASPVVLFVSLAAHACQFGFLLWFENPHIARTYGQRRPVAARTPLHP
MASGQVSGADTPIDGTTTSPFEEDKDGLATPPTMNGRLRAASTTSFPGSTFSKEPEEPVS
RHDLDNKYFHQDLMIFKNWDPFRARDLASMLVLIYGLVPALLPSLPRSIRLTLLFFHALA
WRLFHSFGLGVALQKQGEGKWLVRHFIKHYHYEKEGDAIQDTFTNWKSIYNLSLCMTYAS
YIALAWGCYTIPENWTVGTVVVRHTFGLLLIALHIWCATESFEVLGPFGWFYGDFFIDEY
PHELYYTGIFRFLNNPERSMGGAAFFGLCLIAGSKLLLAQAVIAVAAHWWFLSKVENPHM
RRLYGNTLRKDAGVTKTIRSAIRRVSTHETAAKTGKDFIERLQKNVREVQGTVEKVFEET
ADAVEEFLNKSAPAVKGYVEDTKILLQQSSERFVISRVATDLDSYDASLYSLSLDPSAFP
PLVPHASTSSAPSLRYHLGEPIGVKWTAPANHSRRDWIGVYRLDANKSRLITKVSSQGKW
LGVFDEEWQGDKYKGVGDGEPPEHGELKPEQREGHVVFSGKKLPWRVGRYEFRYHHDGKH
SVMAVSSPFEVYVDKPADADDPFEIHHALTHVVSKTLSLDPETVPQSAEDLVEKARLARS
RQATAALEASTTAALPADKGKGKQPAVEVPPSESPASRSVILSDPDDFVLYSTDEASHIA
YAIKCAFDVELDKEVVLAAANIGKLAARIKEARKVLGMKPGEGGTGMKADLKEG