Protein Info for mRNA_2333 in Rhodosporidium toruloides IFO0880

Name: 10701
Annotation: KOG1159 NADP-dependent flavoprotein reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 611 PF00258: Flavodoxin_1" amino acids 25 to 162 (138 residues), 85.3 bits, see alignment E=7.4e-28 PF00667: FAD_binding_1" amino acids 221 to 438 (218 residues), 108.2 bits, see alignment E=7.2e-35 PF00175: NAD_binding_1" amino acids 469 to 573 (105 residues), 44.3 bits, see alignment E=3.8e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (611 amino acids)

>mRNA_2333 KOG1159 NADP-dependent flavoprotein reductase (Rhodosporidium toruloides IFO0880)
MSSTSLGNGTAPYSPLPLDSRSFLVLHASVTGTAVDVAERIGRRARREGWAVTVKSVTQF
NQAELLEHGLIVFVLPTTGNGHTPPQFVPLWTALLHPGLPPDFLEDLRYAVFGLGDSSYG
KYNWVGKKLSRRLDSLGAHAVVERGEGDDQNEWGVESTFAGWLDQLMASIDPLFPPEPGF
TSHPLDTVPPARIRLEKVASTSAANGQTEQAPLLWTEDASWAKLVKNERVTAEDWYQDVR
EVELELEGVQDSERTRLYAAGDVLEIRPQNSKEDVDRFLASARWTDIADELFLISPTSPD
QPLPPHLPTPFRTTIRYLLTNELDIASVPRLSFFEWLAYFSEGDMQEKLREFCSPAGQDD
LIDYTLRPRRTINEVLYEFRFANIPPEYIFDLLPPIRPRGFSISSSPASHQGKVDLLVAI
VKYKTILSVPRKGLTTSWLASLSPGSRVPVRFDKSGLLRLPPGDPPLIMVGPGTGVAPFR
ALMEERVRCGAKENLLFFGCRSVSKDFYFKPYWDVLVEKGELTMSVAPSRDQENKIYVQH
RIPDYGAHIWDYLSRGGYLYVCGSSTNMPKAVKKAMLAVFQREGGMADEQEAERYWDRME
REGRLVEETWG