Protein Info for mRNA_2399 in Rhodosporidium toruloides IFO0880

Name: 10767
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1133 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1133 amino acids)

>mRNA_2399 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MGALLSLLRELLCPAPPPARIPAKAKPLTNGPRPAWFPFELYRPIIAYAAERREDRLAPQ
LARFCLVSRAFRAEAQLLLDEIFTLALELEPVPGPYIYKDHIKCHSLDYDTGVVCVQLTD
ASFAHLLSLREETKYFALSPRYRRVTFSVTPALSGASFIFCAGPAYEYWFEMSRWPMFLH
PRHVYDFGALAQPSLNSLLALHRTGPAWAHHILQDLPANWARNKTRPEDAIGRRMPGFAG
RSLHPVETLTLRARPAEGLGDNLAPYYTLQYLHLDFLYRPNSPSMDFLECLDGLKSLTIT
LRYGATALNTLSTTNYPSIPRPSKRRAPHNIVRRWMALVATLPCKEQVKLTLRLPPLEPL
HLRSRDKEFWRRVFADLRGLREWPQILPDTVNELVKEVLEALYDEGGHLGTLAACCAVSP
AFANVARPILWRTVVVVCQNAVNPYMEEYDSQAHLPWFSSESWDLAERTRRQLRLLADNI
ELGALVRHFTMADPNGVDRVNTALLWPSDIVLLQDALLRLQAVETVRIGAIFSRDGYDLR
LPARNPRLHTLRLPMVAIGPGFTDSFPKLRQLYIDDCICPEDLRPLAPPVTTLNIRQGIY
DMDGILGSFDPTLTRLELDCVTHASTTADFLSSFALRTCSKLTHITVVLRGGNIYDQRVE
NEEMELKKFYSPSLAPSIRSSGDLPVILRFLSHLPRCQQVTLALKLPQLADPGLRKKHKT
LWADVLREMRADGSWDELLPVTVKDPPREPPNTSPAPLPLVDSPPSRPPTLPLELVEEIL
EILYDEGENAGALAACCAASRAFANFARPLVWRTVVVACRNVLEPYQDDYEREATSKTYS
ARCWDLEERTRRRLRTLAADPELCAFVRTFVVTPPTGIERTYQPMMWPTDFTLVHSALVR
LPAVETVMTCNIRDPNDYTLDLPTSNPRLHTLSMHNILFNTNFAKSAPNLRDLRLQDVEC
RMLLDKDSTPPITSLVIGSCDSHAGNLVMSLRETLTHLKIDGHLTDTGPDGWLPTLTFSM
LSKLKAVTFVLRNLATTRNEAAWTHNSRTLEADIVRDSTATVTHILEIVPYLPRPQQVTL
SFALPPLAKPRQREEDAEFWQHIVQDMRAHGVLDELLSNSVKEVDWSGVFGTE