Protein Info for mRNA_2405 in Rhodosporidium toruloides IFO0880

Name: 10773
Annotation: KOG1910 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3253 transmembrane" amino acids 14 to 37 (24 residues), see Phobius details amino acids 149 to 169 (21 residues), see Phobius details amino acids 1146 to 1159 (14 residues), see Phobius details PF10293: DUF2405" amino acids 1235 to 1386 (152 residues), 150.5 bits, see alignment 9.1e-48 PF10305: Fmp27_SW" amino acids 1427 to 1530 (104 residues), 88.2 bits, see alignment (E = 1.4e-28) PF10347: Fmp27_GFWDK" amino acids 1548 to 1703 (156 residues), 143.1 bits, see alignment 2.1e-45 PF10359: Fmp27_WPPW" amino acids 1997 to 2483 (487 residues), 240.1 bits, see alignment E=1.3e-74 PF10351: Apt1" amino acids 2514 to 2985 (472 residues), 382.7 bits, see alignment E=7.5e-118

Best Hits

Predicted SEED Role

"Cell division protein FtsK" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton or Bacterial RNA-metabolizing Zn-dependent hydrolases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (3253 amino acids)

>mRNA_2405 KOG1910 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MFSLTTLVTFTPTLVVYLIAAYLTLQLVLPLILRLFVLPHHLRIGRFSFSSVSGISWEKG
GVKVRVEKVRCVRWRGRRAGQGIVGETQTDRDKDRAWFLVRCEGVTVDVKKDALVQPRSK
RNPPPPPSSSDSPRPPPPPPPHPSRLSALLSRLSSLLVLFALHIDITSLTLEDTLVLSGT
LCIGGEVALRSAGAERVKAWIRLSKVRLAEVAMKAEEERKQPFPALEMRAPLVVRVEAPL
QHLRATPHQREGWTLKERGVKLQVLFGGAEPVQEDAQTRERTRRGSSSGGLAGRIRKASM
QARRAAQEGEEAEQAGVHVRVHELKRVLDAVADLAAQRKAAKPSPPRRAESAKQQQPKRL
DECPPPRPSPLAYFDSLLLSIPSFVISAHYTTPSHILSAPSTSSAAPLPKTIAFALSVHD
VRADVKLGGMSDEVRGDHREWIGRGEEVAWTVGAEWREVEGRIKMDGSEEEVLLDASKAL
SFGPSRLDVTSTWHPPFLSRSTCPTTDGVPPPCCLHIPQNHNDAIVVLEGFLGEIRGHAP
FETIDSALRIIKARPRKATASRPSSPTTSTGFDAHQQDEAEKRPRLVHGLPRIVGTAMMG
GIEFRIQAPRSSHAADRDPLDSPTLNGDPTDPFFRNWSAPELLCLSFPNGQVSFGGEYVD
RSVRRSESDRRAARRAAKHRRQESRNSSKSRRSAQDGDEDDERGVADGDDRGRSASRGGH
EDRPTRAFEEEFGVPPPPPLTQEYHKRKLKPLKAILNLTKELDRFGLEYKTRFSLSTDIL
NVYILASSSDSLAHENGYSSDSSASNDGWTRRDARLPMLPSDPVRLDILAFGPLEWNSAV
TLLGDETVRAGSDAPVPFVNLSTCRGEHSILLETIEVDLWRPIVMGCLRDLITMFATASA
TSTKQKKYAERATAAGDGFKPIVDVLPSDQNLYIALASFDLRIAGTDPKADAHSCRGVAL
HSGPVVLQYLLQSEHEPGLVGNFAERSALELTEDIRLEANACANPAPKALGGSDLPSRIA
LAKFSILDLSIDPVVDARASRGRKRYAQARGDGQGEEGDDGWELRGRADLADLTGRRKSI
VPPRFSPSATTTVEEKELGKGLIVVPHLAMRLRCQRAAPSDATATSPIDGFIVSFASETI
NLRLELFSIYLCLVAISSLRVLRPTVRPTPGGSSSDARAVPAAPKRPAPLIQLKGEIGDL
HMFPTLPHDTHLFVNLRKINLRFEKTSGLAVDWEKAMLAGQSPTVPGKWEDIIRLRGSQF
RLRPEPDNQGSHPFVISLSSETARLRIPFRYIFSRIVDNAASLVKATKQLVYEHIKGGHG
FIIEPHPEGPKRLPQIELRVGLFAVEMQDDPFETKLNIIWRAGSDEQNSRLERQAAFDAK
VEAIRRAEADGANDQDEGGDTEDSGTRFASRAKSKVNARHTIGIDEAQRDLLAYNSSHWV
RRIRNAAAEQARREETLARRLYGPKDRSSRATANLPIDLVAVSRSAPLARATFHGLSFVI
TKPSFGDDGLHEFLHDVGKGLPRDTKFTLLVPLHFSWKMEEARFQIRDYPLPLLHVPRSG
RRDVPSWQCESDLVIAEEVSGPEAVRRVPCAVIPAHVFQGMGAPYTIVVPRSAMPVKTYA
MPVVKIHASEPTRIGWGNSIQPAIQDVARVVDTLSKASPDPSERIGFWDKIRLQVHWRVQ
LLFPGKAAAVLFHLKGSRDPYALTGFGAGFAKAWKGDVQFRIGLDNPDGEFLQILSDEYV
LGIPNLREYVDTAATGLSTRDSDGETPADGSAYAPSTVGGDEYDAASTVTADEDEASYWI
KVCAKCINGVRWGMGVVLERTCRDKGCEKAGCCGLAPFHRQCRMFDFRPHWEVHTKTSAA
IGLDGEVDDSFAGFRSDFVHFSLSLTSPANLSLPNRKNSMSSDGSVDYSGEHGYNSFHFT
PNAMTHFIRWWKLFDSSMSLPIRQGKLFPSAQAPSPKFGRHTATIKYRFSLAPLFISHTY
RQDTWQDWARGETTVLGIKAKVGRFNVDLHQRAQEMVIRRPEMSETKTVTHKVFYMAEVD
LDSLDLRTITAVFREPEKAELAPPDIDPEDDVSPAPTYDDFVLSEDDHDWVNLNDYHDSI
YTMPVEEEPRMRIMPFIVCPRFTYYRHKDATMSKDWPEENGSSNGTSDSPAEKPKTKFGD
EKSHTCLMGCATDTITVQIKEVQMRLVELEGQLADTDDDDLSAELELRIRAVHRIIERLA
QVRENAHPDFDSSSARNQHGRGPPTPATPTSVEEDSADAGALPHLTNSLYEEWGQWENRY
MIHNPTCQVSNATRDLLLKYYYSSRDRKGFVYYASASVLRFIRDLAEKHEKKHRRDWSRR
KSTRTGGSSQKRSGAWHDSEQANKLLEELSKREGDFWATNEEQDDGRHHFGDHLETDPYL
AAAALPDAFDANSGHLCMFIKPQVSLQSDVDDKSTLIFTAFRAQVKVFQIVDSRIPEDPV
NSEVLHQTFARLDGMQIFYPRQQLPRRDRRLLQAFVPLETLIDLRVEPWGFDRVVARTSA
ALRYDKFNQLRLSSKRDFDDGGLGPGSSQLESHFHTSTDRISFEADKFTLSANPAHFAAV
YNVVTNLVLYSDPARKSRSRDIEALVFTRDFSNLRTLIDTVSSLQQRLRRFGSLGQEYQI
HLDELDDEGRLELFMSRAELFKASNELSLVVEAFTRAQDSNGPKTTSKRAGLQLEAHAAE
LTWHMLDKSDLPLAKFSVIGAEFSWASKQDGSASNRMIIKDLRALNSSPEQVFAEIVAKV
EGCSDENQLAKVDVFAAALWNTHAPVGGIAIIERFELHLHPIKLQLEHRVGRKILDYLFA
ERQQKTGDGGDDTPSSRNGSRLSLPALNSSASRSAESLALPRPSQSSSNANLPLTSSSAS
IRSVETRVRKAISTEALINEDREEGLDADEMRRRAATNRTFIFVEVSSTVLCLTYRSEKE
DKSSLPNIYNITYTTPLIQYRSKTWSFLDMLNEIKRDMIRSVWQQKGQLIGQLLSKTHRR
LPMAEARSAAKQAVQASIRNRMRLVKARASTFAANNSSVPLHERSPPLRHDDPLLGTPAV
RDPASTSSSRLAHLTAHDSSSSSSNEEDNIADSSLPFDVAATELIDPNVEFTDDGEYPQA
IAQARAARDEGAGGGHGGIGPLVEEPESFDEEEGGEKGGAGEGVERDSAQSSGDLSAISF
PTTETPSSRSDSSPYTSLGSTRRRPSSMTQPARSMSTSSRQSIGYPHHNPLRKQTVEMDD
DEKARMLLGRSLD