Protein Info for mRNA_2593 in Rhodosporidium toruloides IFO0880

Name: 10961
Annotation: K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 transmembrane" amino acids 28 to 40 (13 residues), see Phobius details amino acids 82 to 104 (23 residues), see Phobius details amino acids 125 to 147 (23 residues), see Phobius details amino acids 182 to 202 (21 residues), see Phobius details amino acids 220 to 240 (21 residues), see Phobius details PF00153: Mito_carr" amino acids 24 to 111 (88 residues), 83.2 bits, see alignment E=5.1e-28 amino acids 124 to 210 (87 residues), 79.8 bits, see alignment E=6e-27 amino acids 218 to 332 (115 residues), 77.6 bits, see alignment E=2.9e-26

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (346 amino acids)

>mRNA_2593 K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32 (Rhodosporidium toruloides IFO0880)
MRITIADRDPQGERFKGAVWFRGAESMLAGAGAGLVTSIVTCPLDVIKTKLQAGGASNGA
AGVLGESRLTRHIWVTDGFRGLYRGLGPTIIGYLPTWAIYFTVYDQVKRQLEDIRGELVR
PDDPVAHILSAMTAGASGTILTNPLWVVKTRFMTQESGADEPRYRHTWDALVRIYREEGP
KAFYRGLLPSLFGVAHVAVQFPLYERFKVMSRPEDGSDIPSWTILVCSSASKMIASIATY
PHEVLRTRLQIQKNRHAAAVVDKVSNYGLPTTNSATSPQAAPALEGVVKTFQRILREEGV
AGFYRGLGVNLLRTVPASAMTLLTYEELMRRLVCMTHGQDGDSRTS