Protein Info for mRNA_2605 in Rhodosporidium toruloides IFO0880

Name: 10973
Annotation: K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 996 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF09258: Glyco_transf_64" amino acids 695 to 940 (246 residues), 162.1 bits, see alignment E=7.4e-52

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (996 amino acids)

>mRNA_2605 K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3 (Rhodosporidium toruloides IFO0880)
MLLRTTRSVRHRLRLVLCLAVVLAVAGRWGWRQPDQAARICLVGNAETAAKALAVYRQWD
GAFPAAFYVWGEREADGEMRLQEEMRRVALLRPRRGERALPFADGMYASVNEVTSRQRCD
YIFTHDDDLEFRLAPFATYYDPSAPRGNLAAELQYLLDVYRPAIAGFPWQVGDERFEGMK
ALKEEYETEEVAPLTGFDNGMVVYHRSILPLFFPFSPQGEGGFTGKWTLGAHFLQAGCFG
SSLMFGPLIFREHALRLNTLPYDNTVNMDNIPKGQGKTEIRNGLAYVPSSRHPYEYPLND
AYMSFLSSGLRDRKQPWGRALGPKDVFVPQVWLDGDYEPDWILDRIDEFYDVRHESLSRT
RFIRSIEPAKLEAIAARNPPRVSFRIIIFTKNRLRSFQRCWASVRKALPIEDADVHVEVH
LDFDPFMTRFDRDEYDSFLELIKRNPGPARSVAVIKSVQARGLRASILSSWTPNDNHEFA
IFLEDDIEVSPHFLRYAQNMVDAYVYRDHADHRLSAISLYNIRYNEAIESFVSVENGNRP
YIYQQAQSWGAVFLPEPWRRFLTYVKRFPAGKDPLVPDSLTNRWPYAQSWKKYYMRFMAE
EGGYVIYPNLPGGESYSTNHVEVGTNDKVSQTDERRTIHAKFRVPLLPREADFGSLQVYP
PLSSLEVYTMQHQPLEHVNLFARGTEHVESFDKCTMIMTVYSRVETFRDRIEHYHTLDRL
GQILIVWNNVDYPPPAILPDDYAIPVEILEMDRNSLNNRFFPWPQIKYSCVINMAHWDMP
HEHIKYAVDVWKGHFWDHLVGFYHQGRNHVVRRIDGKDVTLYSSTFLSPQLLAGKKPFYS
IVLPSGFIYHRKYLDMYTHQLPREARDYVDEVANCDDLLFNFMMANATGTGPALIEAWAS
MVLDLGNAGLWSRPTHMGVRTECMARFEQIFGRNPLKYTTTLFPVQHQTTVPGLHHYTMS
DTIPFDYPCNKTVYETSQQCAFVMDEEYWDQAGGWV