Protein Info for mRNA_2636 in Rhodosporidium toruloides IFO0880

Name: 11004
Annotation: K01303 APEH acylaminoacyl-peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 839 PF00326: Peptidase_S9" amino acids 626 to 836 (211 residues), 88.2 bits, see alignment E=5.7e-29

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (839 amino acids)

>mRNA_2636 K01303 APEH acylaminoacyl-peptidase (Rhodosporidium toruloides IFO0880)
MTQHTQDNSNSSRIDTALDLASELFHLPTPTAAHWTPAHGGDGGAHSLRAYWDGSGHRKL
THRPSAPTLTVLAPLPHLISRPHRTITRLTVSQLHLTLSQRSLSSLSKRTLTQSLTLSPS
LTVLASTPPTDRSDSIKHVAFSPDGKKQAVFRVTPAKKGKAEKRSVEVVSTESGRVECEV
ECKSEVHGEWYFDSTFGTVAWHPSSHALIYVAEAPSPSAPSPSSSSAQRPTKDKFVYTAD
WGETFIGKKSPTLFLLLLPNSPFASLLSSPSSGASIHRLTGEGKTSYGQPSFLPDARDGS
PRVVVTGYEELRDGRKLGVVYCTNRVARVWVLEFGVEECEGKEEGEKEGEKTFKVVKTIP
VSPADRSSRSPRVIPSSSSTDATATQIVYLSNILGSVHASCAQLHLASLSPSSSVEDRVL
VKQVDAPTTDDDFPGLYIDQLPLQPFVRSSQGEEGWSVVAASSWRSRRVPLLISLATGRV
TSLAPWPTANPESDAALPYLQAREEELESFAVLGTDGERRVVGVRSGCGAVGRVVVADLG
EEGVEWKVVREAGVSDELSAALSRISYTVLPLPHFAPSELILISPIPIDPTAESRPNLPP
LIVYPHGGPHSAYTTDFSYAVAAHVLAGYRVVLVNYPGSTGFGQHTISALPSRLGEWEVE
ATLASAHYLNALSLASRTKGKRLLMGGSHGGWIACHLSARWAGEWDAVVMRNPVTDLVGN
AGMTDIPDWCYEETSTPYSLSSPPSYLTPSAFTTFHSLSPLRHASSVTAPTLLLIGESDR
RVPKEQGRAWFHALKGEGKAEVEMLVFPGNGHPVAETVEAEWVAFESGVRWLAKYTDFE