Protein Info for mRNA_2746 in Rhodosporidium toruloides IFO0880

Name: 11114
Annotation: K00859 coaE dephospho-CoA kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 260 transmembrane" amino acids 201 to 219 (19 residues), see Phobius details PF01121: CoaE" amino acids 2 to 180 (179 residues), 198.7 bits, see alignment E=3.3e-63 TIGR00152: dephospho-CoA kinase" amino acids 3 to 189 (187 residues), 182.5 bits, see alignment E=3.7e-58

Best Hits

KEGG orthology group: K00859, dephospho-CoA kinase [EC: 2.7.1.24] (inferred from 54% identity to cci:CC1G_06170)

Predicted SEED Role

"Dephospho-CoA kinase (EC 2.7.1.24)" in subsystem Coenzyme A Biosynthesis (EC 2.7.1.24)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (260 amino acids)

>mRNA_2746 K00859 coaE dephospho-CoA kinase (Rhodosporidium toruloides IFO0880)
MLVVGLTGGIASGKSTVTSLLKAHAIPVIDLDILARVAVEPESYALSALVRHFGDSILRS
DGTLNREALGSIVFNNEKERKVLNSIVHPAVRRLLAWELAKAWLRGEKICVVDAPLLIEA
GLWKLCGAIVVVYCSEILQLQRLRSRNNLSLTDAQARLSSQRPLSEKLDYADYVIDNSGP
IGDLQNQVDSVVAKLHKRAGWSWVVSWLVPPVGIVRAALRVGWRLWFQGVGKKKGRSTRG
EKKAEEIEMRDRRRRSSAAS