Protein Info for mRNA_2937 in Rhodosporidium toruloides IFO0880

Name: 11305
Annotation: K14521 NAT10, KRE33 N-acetyltransferase 10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1103 transmembrane" amino acids 322 to 339 (18 residues), see Phobius details PF08351: DUF1726" amino acids 127 to 222 (96 residues), 97.9 bits, see alignment E=5.2e-32 PF05127: Helicase_RecD" amino acids 312 to 526 (215 residues), 208.5 bits, see alignment E=1.4e-65 PF13718: GNAT_acetyltr_2" amino acids 569 to 798 (230 residues), 321.4 bits, see alignment E=5.9e-100 PF13725: tRNA_bind_2" amino acids 808 to 1047 (240 residues), 279.8 bits, see alignment E=4.1e-87

Best Hits

Predicted SEED Role

"Predicted P-loop ATPase fused to an acetyltransferase COG1444"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1103 amino acids)

>mRNA_2937 K14521 NAT10, KRE33 N-acetyltransferase 10 (Rhodosporidium toruloides IFO0880)
MSGANATGKKKVLDSRIPALIANGLITNHRSFFLMVGDRSKLQQQVVNLHFLLSQSVAGL
ANPTDAQKKNPRPNVLWAYRKDLGFSTHRRQRESKVKREVKKGKRELGELDPFELFVSVT
DVRYTYYKDTHKILGQTFNMLVLQDFEAVTPNLLARTIETVEGGGIVVCLLQGMSSLREL
YSMTMDVHSRYRSSMSDASPVARFNERFLLSLGNNPSCLVVDDELNVLPISAGKDIVPLD
PDLGVGVARSSSKGKRREQEGEAELRALKESMADTKGIGDVLAEARTLDQAKAILTFTDA
ITSKSLSQTVSLTAARGRGKSAALGLSIALAILHGYSNVFVTSPSPENLKTLFEFIFKGF
DKLGWEEHLDYDIVQSTNPEWKGAVVRVNIFRQHRQTIQYIQPQDFHVLGQAELVVIDEA
AAIPLPLVRSLLGPYLVFMASTINGYEGTGRSLSLKLLQQLREMSRPASALSAPAANGDG
AGAKGSSSSSTLSVARTLKEIKLSTPIRYAPGDDIEKWLNQLLCLDATIATPSKKTLQGC
PHPSTCELFYVNRDTLFSYHPASEVFLQRMMSLYVASHYKNSPNDLQLMSDAPGHHLFVL
LPPLKEGDNSLPEPLVVVQVALEGNISKQSVLDNLSRGKMAGGDLIPWTIAQQFQDDDFA
SLSGARVVRIAVHPDYAKMGYGSRTLQALNSFYSGELLNLDEVQAELEVETFEDVAKVEK
NASLQTDRIGIRDASKMPPLLQRLSERQPENLDYLGTSYGITPSLFKFWKRAGFVPLYMR
QTQNELTGEHSCIMIRGLNKNTDEASRWLGAFANDFRKRFITLLSFKFREFGSITALSIL
EGASALDTADSRRTLVSTDVRDSFSPFDLKRLESYGNNMLDYHVILDLLPGLASLYFARR
FPEDVKLSGVQSSILCALGLQRKSVEDIESELQLPVAQTLALFAKVIRKLTKSLQEILKE
DVARTLPTEDAAAAAAARILPAANGSNGEVSGVATQLSNKDAIAKELEEEGNEVLKQLKE
QQREVIDSLDLKQYAIGGSKDEWAAAEAQVAAKVLGSKQSLSSTVSIKNPNSTKALKRKG
PEQEEGKSGAGGKAKKDKKRRKQ