Protein Info for mRNA_3005 in Rhodosporidium toruloides IFO0880

Name: 11373
Annotation: K19708 PTC6, AUP1 protein phosphatase PTC6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 344 PF00481: PP2C" amino acids 31 to 303 (273 residues), 128.4 bits, see alignment E=2e-41

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (344 amino acids)

>mRNA_3005 K19708 PTC6, AUP1 protein phosphatase PTC6 (Rhodosporidium toruloides IFO0880)
MLRWNVVDDRLGTGWTPQNLEGFEGEVREGEEERRRQVAYFGVFDGHGGDLISRYLRDTL
PTLLESTTASEIPALIDQYRELGGYLKRYRGGPLDRFRKGSEAFNEWRGMGLDELAVSAF
LKADNYVVHSPELEKGGSTATVAFLHSLDLPYSLPFYASSLLSLTIAHLGDTSALLCSTH
SGRVRRLTEAHHADSRTESERLRTSGTGIITDSFGESRWGGVVANTRAIGDREFKPVGVI
GEPEIVKRVIKGDEFASLILCSDGITDTLSDQEIVDLTRGIRDPTRAASKIVSFAEDCGA
EDNLTCLVVPLPGYLKMGGLDTTASRREYRLRGADGASRRQKRM