Protein Info for mRNA_3042 in Rhodosporidium toruloides IFO0880

Name: 11410
Annotation: KOG0252 Inorganic phosphate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 672 transmembrane" amino acids 103 to 124 (22 residues), see Phobius details amino acids 151 to 169 (19 residues), see Phobius details amino acids 181 to 200 (20 residues), see Phobius details amino acids 206 to 225 (20 residues), see Phobius details amino acids 254 to 279 (26 residues), see Phobius details amino acids 294 to 313 (20 residues), see Phobius details amino acids 353 to 381 (29 residues), see Phobius details amino acids 393 to 412 (20 residues), see Phobius details amino acids 424 to 443 (20 residues), see Phobius details amino acids 463 to 480 (18 residues), see Phobius details amino acids 490 to 511 (22 residues), see Phobius details amino acids 517 to 535 (19 residues), see Phobius details PF00083: Sugar_tr" amino acids 111 to 312 (202 residues), 30.6 bits, see alignment E=8.8e-12 amino acids 363 to 550 (188 residues), 53.4 bits, see alignment E=1.1e-18

Best Hits

KEGG orthology group: None (inferred from 54% identity to cne:CNH01210)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (672 amino acids)

>mRNA_3042 KOG0252 Inorganic phosphate transporter (Rhodosporidium toruloides IFO0880)
MSVNPDDTVQEYKERQAHDYDGTASPDSGSTFDPRSATEEELLREALFPSDSYTADGRYW
ADLPSGEKWSFASGQFSRETRRDFSYVWNMFKKDPVQPFRAYFNKYVLTGMGLFVEGYVL
FSIGNLKSLFQSAWPACWKTHAVCNKNWTSAVSYLEIVGILMGQSIVGFEGDWIGRKFGL
CQDALVMLIGAILLTSVWGVTLNGWVIAYAWSLFIYGFGVGGEYPMTGTRALETKVYGPE
GTRDDRLHRGRNVVGSFLMQGWGQVFNQCILLICLMIFHSGDTNPPFSPKTAQATYRVQF
GLGILLHLWLFYHRLYQVHDADNLLTTSKRKHNVSGYDGHSLRLLTSHYWGRLFATAGSW
FANDVFFYGTKVFAGTFIHIIKPGASLVVTWEYNLINLAVSLTGYYMAFFFIDHKLYGRR
RMQLVGFAFDFIIYLFGAIFFHQLQVPGAPIAAFQFMYHFSSFWNQFGPNTVTFLTAAEV
YPSSIRSTAHGFSAACGKIGALIPTVLFNYIDDRTKLWFAFPFGVLGVVCSFFFLPDTTG
MDLREIERYWRYVRAGKANQYHGIAVHPHHLSWYERVVLKRHLAYDPVQDRLDRIDELRV
LYESSLIAETDPTAQDVNHASITPAVAEYFRREAPASQRRHNQLDKERAIRGEGVQSEKV
YGSRLEETLGQQ