Protein Info for mRNA_3144 in Rhodosporidium toruloides IFO0880

Name: 11512
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1242 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1242 amino acids)

>mRNA_3144 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MSNEGAMSTRRAQTGLTQLTLVSRAQTGLTQLTLVSLASTRSRGSSGCCYALRSRSVPSG
PSRDPPDAVDAASPPRSSTRTSYRRYSPSQVTGACGRPGQRQVSTQEQADPPRALHEIVA
DRLYRAIAYSTDSTLRSTSTFPARQPRRTRMRLTLVPPSAYPVPPLLQLHVLDPPTLPPP
RSLRTPPAWVKAKKALNEVGLQLPSYLAADRALWWQVAVIEVEWNLEEEEIVVKFVDGAE
ERWELGGGRSLSNELVVDSEVEDGVTTTPPAPNEPQPESRWSPRNVLARLRDLSHELRSA
YEDLGTSSAHDPLAPDISSESDYLLLMQLSAKPAQQVPFEWSDAQTLYEYAMEGLIDEDE
LDADEGVAKKRASSKGPSQPGSDGVDSPSRDSHGKFHSRRRPSRTKASVKGEASAGRPPY
DHLSMIHLLSTIRTFLLDLFAHTIIPHLQQTTPPTYSLWAADAAIVWCRREAVKKGAQVA
DLILELLDDDGDAFDAALDDDRDEKMDDIFVEDDAVFLHGKAGVAREQAEEEAKQERLAT
NPLRSMMDDFALRSWCESALDRHRAMDDLEWDEVTGKPLWIKPVASWDVSKPADGEASDL
EDNTGGSSFGFGGGSALSRRFAGTYPSPPTSPPLVDDIPVLPRPHLRSFSTSPDPDATDE
EDAASEPDFFASSTSANQHRPEFFRPEDLVGEQFLPPKLPKELLVAMGDRGPEMEVQRRS
VVELLNEIAGLQKNIYELQQFVSKEAGVWEEARAEERKGKTADSDAHAVSGLRSPRPSAT
SPPPPTNSNKTIPLRAQPLRHQTADRRLSSALHTALNDIAPTEQDRNSMLKKVKLPKSQS
ATPKPRKRQKFNLENYKRVQALSTMVRADPPEQQDGSTRKKKRKRERHDEAGRGGAFSPT
QNALRLRAAIDGSTPPTAKKPRKVKSIKREPASENVLAPPSPILRPSVPPAPRRALSTGA
IASSATSDRHRTVIELSERRRRSLSDASHLAPVMLPSLPVSAVRTGVEVGAGAAGGLEEE
EADDEFEEVEVGTKFAEEDELADWDAPVTAPSLAWSSARAPHGGGEGVEDEEEDEPFAVE
FEAPTRPPSPVPRQPAPPQSSTSFAVQIPLSPTPHASTSAEPANCLLHTPATPMRPRLER
SIPFTPASPQFFVAPDLLQPVARRPTQVIDVSPTPTARTTSPAPSSSAAASSPSGLAQRL
RDTLAAAAADPCPASNPHAEGGIEVGEEAGLGEQGSEEELRE