Protein Info for mRNA_3150 in Rhodosporidium toruloides IFO0880

Name: 11518
Annotation: KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 PF08022: FAD_binding_8" amino acids 45 to 149 (105 residues), 46.4 bits, see alignment E=3.8e-16 PF08030: NAD_binding_6" amino acids 156 to 312 (157 residues), 72.8 bits, see alignment E=3.6e-24

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (329 amino acids)

>mRNA_3150 KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins (Rhodosporidium toruloides IFO0880)
MQDWVYAAVAIWAAERVFRGFHHVGSVVGARFFLRAPLVKARTEVQDDAIKLSVPANGQT
WTAGQHVYLSFWGLDLLRRPWLFGWTQSHPFSIANVPSADATASREMRFVLRVQGGLTRE
LAAHIARRSEAKGGQAVDCWVSVEGPHGSAPAAADFDTLLLVAGGSGITHPLSVAADVCR
RAAAGEAVVTSKIKLVWALHRLEQAAWVQETLEETRSWAEKANLDLSVSLYVTRTASAAT
SGTSSPSSSASIDEEKKEDHGEEINAGGKCRKYSGRPDVHDEVAKAVSDSPGRTLIISCG
PEALANEVAEAATPYLSSAVKVDIARFEC