Protein Info for mRNA_3159 in Rhodosporidium toruloides IFO0880

Name: 11527
Annotation: K15437 AIMP1, ARC1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 PF00043: GST_C" amino acids 85 to 155 (71 residues), 26 bits, see alignment E=9.1e-10 PF01588: tRNA_bind" amino acids 267 to 363 (97 residues), 96.4 bits, see alignment E=9.2e-32

Best Hits

Predicted SEED Role

"Methionyl-tRNA synthetase (EC 6.1.1.10)" (EC 6.1.1.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 6.1.1.10

Use Curated BLAST to search for 6.1.1.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (432 amino acids)

>mRNA_3159 K15437 AIMP1, ARC1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (Rhodosporidium toruloides IFO0880)
MAPSLTLSSSKPAGRAATLINEVYGQYVPDLTVQQGDKVSLSTGSSEVTSLADVASQLFE
AAGKTNDALGASEEQRTQAKSWLKKVEELDVEKPEELEAVDAELTSKTYVAGETFTAGDL
GVFAAVHPYMAQASHSTLLSHPALTRHFDHIQHLPLVSTALARSSTFSPSVVSIDVNNVP
VVEIKPDAKVKKPKAGEAAPAAEVKQAPVEKIKSDKVKGEQKAKAAAAPGEGEKKPKGEK
KEKAPKEKKPAAPAPVAEAPAPWMIDLRVGKIVDVKVHPDADSLYVEQIDVGEAEPRTVV
SGLVKYKTLDEMRNATLITVCNLKPASMRGVKSFAMVLCATSPDGKDGGVEFVNPPAGSQ
PGDRVYFEGFADKQPLDLLNPKKKIFETVQPGFTTLENKDAAWVDKESGKVYKIVTDKGV
CAAPNFVGASLS