Protein Info for mRNA_3299 in Rhodosporidium toruloides IFO0880

Name: 11667
Annotation: K19704 PTC1 protein phosphatase PTC1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 543 PF00481: PP2C" amino acids 131 to 234 (104 residues), 42.9 bits, see alignment E=2.4e-15 amino acids 304 to 512 (209 residues), 171.3 bits, see alignment E=1.7e-54

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (543 amino acids)

>mRNA_3299 K19704 PTC1 protein phosphatase PTC1 (Rhodosporidium toruloides IFO0880)
MCADTDDVSDTTQLTLHLPHSDSPAIPPLHTRRSGSSLSPLAKDGSGSPPNLRIDVDAVN
ATTSPAPEEAGGPGLIPSSSSSSRSVAVGAKMSDPDARTVEQTEADGKDTYGTLNQHPKR
GENEECGFKVGVSVDRNKKCRRVMEDAHSFIYDFGGIRGQGYFAVFDGHAGKHAAEWCGH
HFHEHLLDNLRKAPATPVPDLLNATFHTVDQKLSELAAQDGTHSGCTAVTCFLRLEEDDG
QPAGEASGVSGEVVEVREGEKVEADAEGALKAARGETQPLNDESKRGLAGDGGESAEKGG
LGARTASDVKNKIKNMLKGHGSGSSFGNESALSTSAGNTPQSSANPSPTSTRSTQSTQSS
VATPDVSISKPAVKKKAAKRTLYTANVGDARAVLSRGGKAVRLTYDHKGSDMREAKRISD
AGGFVLNNRVNGVLAVTRSLGDSSMKEFVVGAPFTTETTLGPEDDYLIVACDGLWDVCSD
QEAVDLIHDIDDPQEASQKLLDHALNQFSSDNLSILVVKTKLGDSAAKVDGFVEGPQHGH
ASA