Protein Info for mRNA_3371 in Rhodosporidium toruloides IFO0880

Name: 11739
Annotation: K13806 DAGL sn1-specific diacylglycerol lipase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1324 transmembrane" amino acids 1007 to 1028 (22 residues), see Phobius details PF01764: Lipase_3" amino acids 941 to 1110 (170 residues), 54.7 bits, see alignment E=5.5e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1324 amino acids)

>mRNA_3371 K13806 DAGL sn1-specific diacylglycerol lipase (Rhodosporidium toruloides IFO0880)
MQSPTASRVMRHDVAHHMTRVSLRASALFIEAIGESLQCGTVTGLGVTRRALIAAVSSAR
ALHYVKEGLDWTGKDKEGKKSEDTFLQVLDKYTNLGIYLIHHTFTLAELFTMSGFYLTLN
TLQTGFSAAEESVRMLDSILGSNESSRALSSIITLIRDELTREDPHFRPVGLLADQEEQN
EEKQKKAGTLSSLTALTKALTAFACLQTATHRRTLRELKMRVVYDCTVVVEGQALAVATS
TVSPSPHPQSSHNYDQHSPATAPPLHRPHLSQSHSHTHLAPEPDHLLTDVRSELEARAHA
ALVAKGKSAPSTPARSRQASVAFDLSALAGPAEMTSTSNDGMEEEEVELVAAELLDPRPE
EEIVKELSALCGSPTRARSLAPHDPREGYEAGDEGETSETDEDEEDEGMMTAEEADGEVP
PEVQAVLQQLEAQYAAAEARSSAKQQQAKSSPASTVSPSTSSTVRAPQPRKRGTHLVRAD
SNGYSYEIEIEETTTTMTTTVKTVEEVGGPSAKVVQKASRPRIFGLTDEEALRSREASVA
EDQELEMSDTEGEWVEIASRMSPRGAAYPYAVTSGEDRDEWPTSQGGTDVEGNAPLSLAG
LSRQDAIDHPEQSKQRLQLVLSTMTKKFTQRRRTVRRVMTGSSTTGSPSRSSSHSQSPAP
GSRGLKRRWPRERSRQPSFTAASAGPSSESNTPTVASPTPSPKGKGRSVFRAFSRGFKGY
KRSDFLTPPNSAADTPLDLSDVDAPIFDAMPTFTAPVQVSAPQTPDARRSRESSRQHVQP
FPTMPSPHKLSSPSKTFLTLSPDPPSSPSKPRLRRTTSVQTMRSTLTTTCRTESMPTGEP
EPKSGNFPHQHLVSNLQHFARYSSAAYGQSFLRILGIAKHEFKFPHTEIHANNHAFAHHV
GIHVEDILLSSFTNPAPTFGTGKLSPIVNYVALDHSIKAVVLACRGSLGLSDILTDLTCS
YEPISVHDGDPHASYFVHSGMYGSATVLQRGTVHDVIRDALKRFPDYGLVICGHSLGGGV
ASLLSLLWSSRSSTFAEHARSIEEHTGHSIAHPPISTPFVTSYTSGLPPGRPISCYTYGV
PCVASPDLVAYCRGLVTSTIHNYDIVPTLSLGVLRDFKSMAMGFYAEQGVCEEIVGRVIG
LCQKRFMARRAAKKEDTGSSYRPSSPPTGDDDCDVTPESLTDPSDESRLVPLTDAELTAG
RGANKALEPTYRDPSLLGTDLVAGDSELSDWLWSLRTTIRAGSDSEKLYPPGNVYVVENY
TVFISGESSATGKYSRREGRRVLLRAVDDVERRFSEPVFSRSMLSDHSPAAYENNCDLLA
AAVV