Protein Info for mRNA_3473 in Rhodosporidium toruloides IFO0880
Name: 11841
Annotation: K11578 ZW10, DSL1 protein transport protein DSL1/ZW10
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2898 amino acids)
>mRNA_3473 K11578 ZW10, DSL1 protein transport protein DSL1/ZW10 (Rhodosporidium toruloides IFO0880) MPALDQFLADIGAGSLSQAVQLPPPGADAEGPAAKLHKRLDEEIIATNDKTLDLLKENWD DFSTQLKTGDELIAKLEQEERDLKSLEEEVDGPDAFLPPLVAHLEQQQNLAASHLLSTAS VSLLSALLAFHTTTSTLASATTSGALTSAVDALRQVTSAVEEGAEEWIEQTDVWKSLVRW AGEEDSRLEAALQTALESCFDISQASPRNGDKATLTLRERVTAAPNGPHLNVQEVLSGLE EIAEITGRPSQIEGFLARLAKQILRHFVAPYLEANGGLRKGAKVAFSFEEPSDGVHVATL GPSDEEEHDTIAGLSSFLAFFTSHSSLFPSDNSQPSRYAATLTAHLTPSLQSHLISSHLA PNLPSSTSDFTAYLSLLSAASDFESTFLSQHHLFAFLPASTRQEGHEVEEQRVIRSWAGR VPHHWARHVGDAALSRIRNVVKGWDWAEGEMVEVEVREEEEMLGLLLGLGLADDDDEDAI KKLPRELVLQTVPRGAKREMTKEEALAPKPPRPRTPTPPPPKPPIVSPPPPPELGAPEAA PKPTLKRGKLGAAKIAAPLPPRSPSPPPLFQGGDAPTEAFDAGPAAESSYVPSAEPIVED AADEPVAPPAQVEDAQPATFEAHPLDLDAVEAPTPQIDETFEPFEAPAPTAAGIETTADQ ADPDDPVQPHEYRAQVHEGVGEEEEVKKEEEDGADVALNDVEQMREEEKPQASAEAERED QADSAHVDEMLEDSQDFAHGGEEEKPVIKEESVEPQIPPTPRPPRTQAVASSWFDDQSQA YQPEPYQPEAYQPDSYQPEPYQPEPYQPEPYQPEAYQPDSYQAEPYEPEPSYQPYSPYEP EQQPQLDSDYAREEEADIKSFEVPDQHDPADDFYGHHASNAVAPTYSPVTDAEIAEASQT EPQSNAPDVSTQQTYQSEENAPHLPGHGSYDQSGESAPQLRATYDEEEDPYADEQQQWWS YEPTSEADNNVATSESVSEDSVPSTEAYDPYAPSATALDTHEPPSHDDFFSPHQESRPAP EQQHESHAPQQGYASYDAGSYDPYAPTQADAPSPPIHTEDQRNAYSAPPSQADVYTPSSA PAPPPPSTVAPPPPASSAPPPPKASGSAPPRSSASKRRVFATDGLPTPPIASAPVQPPQA FSPPSQPPRTIVSPPPEDQQASYVPMVPSAPVEPVPPLRQAAPASAPSTRPSSAGFSRSL PGRPSSAQRQDGPILNHIQQRFVSPPPTIANPYVPMSLPPSAQPQVASSSSYIPANDPLF ADLLGGSKNSSRPAANYFVPDPPGPPQRSSSASSHSSRSAPQNQQHPSYPSQYPSAGYDY QPQHQQQSYAPQQQQQPYAAQGHGDSFVPSYNGYEQDSYSPYGYEPQQHSAMRLRGGGEG DFEEDEDEDIDEDQCHVVLRLRGGADLGDMDEDDGNRSADDWGFGDDASPDGGDDDGWGF GDEDVVPPTPPSPLPTSQPRPGVIAASKSATEPPKPSITRHVPSASISSATSASTISPRS RPSSYVYSSAVAAPSRPVSLAPPPPEEQAEEVGDEAWGFDDELEAPSPASEPAHISAVSS PEAHPPPGQPQSTNVAEDPSAPPAIALPAAPHLEAEVQAPETGGVDEWGFDADEIGDEGE QQPPPADELMVAEDAEELLDYERAMESNEGVRASPPPAAVADEVVDAEAAPFVEPTSPVA PLAQDAPADAEVLQDDGWGLDDREEASLIATSESEPVAPAEAPIETSDTLIGSISLPPAP LDDGPNDEPDAPQPKLDAFPLENAPEEQQEDDSAAAQSAPLSPDAQLQQEVRETAEAPEL ETEGPMKTRDSLSAAPPPAEPSALNASAEDIDEPFPAIPHPEEPHTPRIATPLPHHDAEQ PSSASIATEQSLFDIAAGPVEDAAVVAGGEDEDGWGLTPEDEGAQGALAATDSFLADRKE ADAQDDVFPAVPAVIEHAVMPDDSDFADFDAPQVSEATRSHGWEPLEDPGQQISSPPLSR VHSVDHDHEDVPVFADSVNVEPFAQEQVALPSSGSTPHQPHKASISSPELIDHADAWDID GEGAEALEASEEAEEAYDGVHDSTVQHELDRPTQRDESAIQHEAMRPIVDDAVVVPGILL PAQDAHPQQRTFTPPPTFLPDNDAAPLDSQDDAAAVDDEGGAEVLDEPDFEAQEGPEPIE GESTVQHQSQRSVALADDMPHEPIAAEEVQPQQHTFSPPLESLPHEKDAVEGWDLDEEAH DGAAVLEHDPPIDVEQSAPPVPGESAVQHVAERHVVPAVGDTAEVLPAELLQPERHTFSP SPTSVPHEEQATTSPPEPADDDAGSDDPWDLEPVEPEPETVSAAAPAAESLDADEDAAHV ETQAQQHESDVVGDSTLFADTALLATIPRDSAEGHTSADLAPTASQPTTAPPADDTSVTP PSEPTSVVQHIEERPIAPESVKSDLAALDSQPQQHTFDIARGAVPSPSAKDREVDQAVQT STSASASGDEWSWDDLQDSSSSHHTPATLAKLPSASEVQPPEAPEMQEPTETQEEPAVAR DPPAHTSSKSIDEWKWDGDDTADLASGPVTQAAPPYSNGAGAADSTPAPAEPAEPSPPPV RREKMMVSKRSREIVKIAQGVLLEACHVADPSFEHPDFSVAVAPLLQTFVSLLSLYRATA AVHNSNLLASVPAIGMQFANDAEWIGREVERIWREASEGKDLQVTAKQAREVELAFQSTR QLGRDTRRKQIAIQRAALMESLDEANGFLRTSDDAHFAACERALQQVTHTLHRLSLVWKP VMTPTALYTTLGGLVNEVLLRVLDEIEDQTDISEAESVRLNKLCKMLHELESLFDGSETT AGREVPVWYKFCFLSELLEASMADIMFLFDHSHLVDFSPQEIVKLIRALFADSPLRNQNI EKIITQGHPAAPPEEEDW