Protein Info for mRNA_3515 in Rhodosporidium toruloides IFO0880

Name: 11883
Annotation: K01277 DPP3 dipeptidyl-peptidase III

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 696 PF03571: Peptidase_M49" amino acids 145 to 694 (550 residues), 716.6 bits, see alignment E=9.2e-220

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (696 amino acids)

>mRNA_3515 K01277 DPP3 dipeptidyl-peptidase III (Rhodosporidium toruloides IFO0880)
MTTRVDKSRYLADSNPPVCSLRIADSFKALTREEKLYAHYISQASWAGGEIIQRQTTPTA
ERLCDLVIATFSAEKGKVADLAALKAKSGVSDVDWNELLAYSAQVLSNLSNMRSFGATKF
IPRVSEQSFEAVVKASQRSDVALPLWQELKEEIYSLNPEASLSIGKPSAGHISAYYPSSP
APSDAQVDEVQALCDAAGISTANTRLSRISDSELVLLVASVSDLPSHYPKSLKSDKLGFE
VRLQAGDYADALSKVNAALVEAGKYAANDNQREMLKHYAKSFETGDIEAHKEGSRSWVKD
VGPVVESYIGFIEDYVDPFGARAEWEGFTAIVNKAESAKFDTLVQGAAEHLKTLPWPKEY
EVDVFKRPDFTALEILSFATSGIPAGINIPNCKESLGFKNVSLINVLSAKAPGEPCTFIY
PDEVEQYRAWEDKAFSVQVANHELLGHGSGKLFQQRADGSRNFDPEKTINPLTGKPIESW
YMPGETYGSKVGPVSSSMEECRAEAVALYLASNADIATIFGHDTKEAQEDLVYYTFLVMM
RAGVRALEFYDPTTKKHGQAHMQARLGIAQWLINHDIARVEFVHDDAGNLVDAFARVDRK
AALERGKDVMGQLLVEIQVRKSTGDGPGATKFYTELTAPSAEWVEKLRPLVLAKKLPRKV
FVQPNTVVNPSTGDVELVEYPTTPEGVVQSFIERDL