Protein Info for mRNA_3572 in Rhodosporidium toruloides IFO0880

Name: 11940
Annotation: K11314 TADA2A, ADA2 transcriptional adapter 2-alpha

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 570 PF00569: ZZ" amino acids 28 to 78 (51 residues), 25.6 bits, see alignment 9e-10 PF00249: Myb_DNA-binding" amino acids 98 to 138 (41 residues), 45.4 bits, see alignment 7.5e-16

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (570 amino acids)

>mRNA_3572 K11314 TADA2A, ADA2 transcriptional adapter 2-alpha (Rhodosporidium toruloides IFO0880)
MTVTKRKQKPRETGGPDTAVSAPQLESGMKATCDSCSTDITHTVHIRCAEKVGERLTCPD
FDLCVDCFLHGKSLGPHRANHAYRVISSHAFPIFDPDWGADEELLLIEGAEMYGLGNWAD
IAEHVGGRTKEECYEHYMRTYIESSDYPLPHIPPEIDPTNAESFQQRKKARLEELQSRPI
PLPPPKPLASAPTCHEIAGYMPGRLEFEHEYENEAEVLIKDLEFGRVYHFGGELQPAAPP
TEKTAAEKEGEGANGAAEEEKPLPDGEKEGDEPEAELDLKLAILELFNERYDKRMQAKEL
IFDRGLINYKTLSAAERKRSKEERDLITRTKVFARIQTAQDHEDLVEGLLYEITLRKRIA
ELQEYRRNGVTTLAEASRYEQAKQQRLSSKAASYRDSISLSFDRAAASRRPTPQSTLVQQ
LKNRPAPPLTLATAGSLQLLTPLETQLCSTLRILPRPYLFLKEVLLREYVRLKGNMTARE
ARRAVVREKNGELLGPEEGVGGEWGEKIERVWEFLRDSMGLKERVMVGMDGDMDDGGTAD
EEMDDDEVDADGDDAMALDDEAPKPAAVAA