Protein Info for mRNA_3664 in Rhodosporidium toruloides IFO0880

Name: 12032
Annotation: K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 306 transmembrane" amino acids 17 to 37 (21 residues), see Phobius details amino acids 58 to 80 (23 residues), see Phobius details amino acids 101 to 121 (21 residues), see Phobius details amino acids 263 to 286 (24 residues), see Phobius details PF00153: Mito_carr" amino acids 14 to 90 (77 residues), 39.7 bits, see alignment E=1.8e-14 amino acids 101 to 186 (86 residues), 57.2 bits, see alignment E=6.6e-20 amino acids 197 to 294 (98 residues), 75.3 bits, see alignment E=1.5e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (306 amino acids)

>mRNA_3664 K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 (Rhodosporidium toruloides IFO0880)
MDSVEAALSPVPSTPFSTALVSGGLAGTAVDTLFFPIDTLKTRAQSEQGFFRAGGFSGVY
RGLGSAVVGSAPGASLFFTSYELSKDALPKFFPRLGTTDLAPVLHMISASLGEIAACMVR
VPTEVVKQRSQTGSKGTRSWVVAKTVWQGEGLRGFYRGFGSTVAREIPFTCLQFPLYERL
KLLLARRTLGHSASVSDLPAWQAAACGSIAGGVAAGLTTPLDVAKTRIMLANQTSSDPAA
PAQRALALLPTLHRIYAREGASALFAGVVPRVVWISMGGAVFLGVYEKAKAVLRSDAERT
RGRERD